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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
Assay category
32
DNA binding
Target of assay
25
histone
25
histone modification
19
transcription factor
13
narrow histone mark
12
broad histone mark
9
control
2
RNA binding protein
Date released
25
August, 2017
5
December, 2017
2
August, 2021
Available data
936
bigWig
898
bed narrowPeak
890
bam
564
fastq
554
bigBed narrowPeak
183
tagAlign
78
bed broadPeak
63
bigBed broadPeak
32
bed bed3+
3
tar
1
tagAlign bed3+
Organism
32
Homo sapiens
Biosample type
19
tissue
10
in vitro differentiated cells
2
primary cell
1
stem cell
Organ
13
pancreas
10
connective tissue
4
adipose tissue
4
liver
2
epithelium
1
embryo
Project
32
AMP
Genome assembly (visualization)
32
GRCh38
32
hg19
Lab
32
AMP-T2D consortium
Audit category:
13
missing controlled_by
Audit category:
5
inconsistent control read length
BIOSAMPLE
ASSAY
32 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
13
white adipose tissue
4
liver
2
in vitro differentiated cells
adipocyte
6
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
primary cell
hepatocyte
2
stem cell
hESC
1
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