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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ChIP-seq
5
MeRIP-seq
Assay category
27
DNA binding
Target of assay
311
control
233
histone
233
histone modification
130
broad histone mark
103
narrow histone mark
27
transcription factor
14
RNA binding protein
5
nucleotide modification
4
recombinant protein
Date released
12
May, 2021
6
November, 2017
5
May, 2024
5
November, 2020
3
November, 2018
1
April, 2019
Available data
9
bam
9
bed narrowPeak
9
bigWig
9
fastq
4
bigBed narrowPeak
Organism
32
Homo sapiens
Biosample type
12
cell line
12
in vitro differentiated cells
8
tissue
Organ
9
liver
5
heart
5
pancreas
3
epithelium
1
kidney
Project
32
AMP
Genome assembly (visualization)
hg19
448
GRCh38
Lab
12
Kyle Gaulton, UCSD
10
AMP-T2D consortium
5
Patrick T. Ellinor, Broad
5
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
3
inconsistent ontology term
Audit category:
1
missing controlled_by
assembly!
hg19
BIOSAMPLE
ASSAY
32 results
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ChIP-seq
MeRIP-seq
cell line
HepG2
9
EndoC_BH1
3
in vitro differentiated cells
embryonic stem cell
12
tissue
left cardiac atrium
5
islet of Langerhans
2
kidney
1
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