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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
total RNA-seq
18
small RNA-seq
9
WGBS
6
ATAC-seq
3
single cell RNA-seq
2
FAIRE-seq
Assay category
65
Transcription
9
DNA methylation
8
DNA accessibility
Target of assay
3
control
Date released
572
February, 2021
283
May, 2020
277
May, 2021
250
October, 2019
218
June, 2019
120
May, 2019
114
July, 2018
82
July, 2019
79
April, 2019
69
November, 2017
59
November, 2019
49
August, 2021
16
March, 2020
16
October, 2018
6
November, 2020
5
April, 2018
5
December, 2019
1
August, 2017
Available data
85
bigWig
82
bam
65
tsv
23
bed bedMethyl
23
bigBed bedMethyl
7
bed narrowPeak
4
bed bed3+
4
hdf5
2
bigBed narrowPeak
Organism
82
Homo sapiens
Biosample type
64
tissue
18
primary cell
Organ
21
heart
16
connective tissue
13
brain
12
adipose tissue
9
blood vessel
9
vasculature
7
kidney
7
liver
5
epithelium
5
musculature of body
4
pancreas
3
artery
1
limb
1
pericardium
Project
82
AMP
Genome assembly (visualization)
79
GRCh38
72
hg19
Lab
82
AMP-T2D consortium
files.file_type!
fastq
BIOSAMPLE
ASSAY
82 results
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total RNA-seq
small RNA-seq
WGBS
ATAC-seq
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle
2
2
2
omental fat pad
4
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
heart
2
1
1
+ See 21 more…
primary cell
cerebellar granule cell
2
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
Purkinje cell
1
cardiac atrium fibroblast
1
+ See 10 more…
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