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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
198
ChIP-seq
136
total RNA-seq
42
ATAC-seq
5
pCHi-C
4
GRO-seq
4
Hi-C
2
Capture-C
2
single cell RNA-seq
1
DNase-seq
Assay category
42
DNA accessibility
Date released
12
August, 2021
12
February, 2023
5
May, 2021
5
November, 2019
4
February, 2021
4
October, 2019
Available data
21
bed narrowPeak
17
bam
12
bigWig
7
bed bedgraph
5
bed bed3
4
bed bed3+
3
txt
2
bigBed narrowPeak
Organism
42
Homo sapiens
Biosample type
260
tissue
200
primary cell
42
in vitro differentiated cells
28
cell line
Organ
17
connective tissue
Project
42
AMP
Genome assembly (visualization)
42
hg19
17
GRCh38
Lab
32
AMP-T2D consortium
5
Kyle Gaulton, UCSD
5
Struan F.A. Grant, CHOP
Audit category:
10
inconsistent ontology term
organ_slims!
blood
BIOSAMPLE
ASSAY
42 results
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ATAC-seq
in vitro differentiated cells
neural progenitor cell
10
adipocyte
8
embryonic stem cell
6
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
chondrocyte
5
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