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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
29
ChIP-seq
10
ATAC-seq
4
DNase-seq
Assay category
54
Transcription
29
DNA binding
14
DNA accessibility
Target of assay
18
histone
18
histone modification
14
broad histone mark
7
control
4
narrow histone mark
4
transcription factor
Date released
66
February, 2021
26
October, 2019
May, 2019
3
July, 2019
2
June, 2019
Available data
97
bam
82
bigWig
71
bed narrowPeak
58
tsv
22
bigBed narrowPeak
6
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
97
Homo sapiens
Biosample type
66
cell line
29
tissue
2
primary cell
Organ
687
pancreas
681
liver
593
connective tissue
442
adipose tissue
312
epithelium
215
brain
190
heart
139
kidney
135
vasculature
130
blood vessel
107
limb
97
artery
66
bone element
60
blood
60
bodily fluid
50
musculature of body
42
nerve
36
embryo
24
spleen
20
vein
18
ureter
8
skeleton
7
eye
1
pericardium
1
pituitary gland
Project
97
AMP
Genome assembly (visualization)
90
GRCh38
90
hg19
Lab
97
AMP-T2D consortium
month_released!
May, 2019
BIOSAMPLE
ASSAY
97 results
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total RNA-seq
ChIP-seq
ATAC-seq
DNase-seq
cell line
smooth muscle cell of the coronary artery
52
6
8
tissue
tibial artery
23
1
2
coronary artery
1
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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