Experiment Matrix

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BIOSAMPLE

	ASSAY
1734 results Clear Filters	ChIP-seq	total RNA-seq	ATAC-seq	single cell RNA-seq	snATAC-seq	WGBS	DNase-seq	pCHi-C	Hi-C	RRBS	MeRIP-seq	GRO-seq	STARR-seq	Capture-C	CRISPR genome editing followed by DNA sequencing	HiChIP	small RNA-seq	CRISPR RNA-seq	CRISPR genome editing followed by sgRNA sequencing	CRISPRi RNA-seq	...and 6 more
primary cell
monocyte	85	54	15					1
pancreatic alpha cell	13	52	35	12		31			1
Langerhans cell				85	48
pancreatic beta cell	13	21	23	12		16			1
CD8-positive, alpha-beta T cell	33	4	2					1
exocrine cell		39
pancreatic acinar cell	8	4	9	12					1
pancreatic ductal cell	13	4	4	10
naive thymus-derived CD4-positive, alpha-beta T cell	2	1	22					1
pancreatic endocrine cell	23
CD4-positive, alpha-beta memory T cell			22
endothelial cell of umbilical vein	17						2		2
skeletal muscle myoblast	13	1					2			1
epithelial cell of proximal tubule	9	1					1			1
macrophage			11					1
hepatocyte	4	5					1			1
pancreatic delta cell				11
skeletal muscle satellite cell	8	1															1
osteoblast		5	2				1	1
pancreatic cell				9
pancreatic polypeptide-secreting cell				9
cardiac fibroblast	4						3			1
peripheral blood mononuclear cell					8
kidney epithelial cell	4	1					1			1
mesenchymal stem cell	7
mesenchymal cell				6
B cell		2	2					1
naive B cel		2	2					1
naive thymus-derived CD8-positive, alpha-beta T cell		2	2					1
T follicular helper cell		2	2
T-helper 1 cell		2	2
T-helper 17 cell		2	2
T-helper 2 cell		2	2
astrocyte of the cerebellum	2						1		1
brain microvascular endothelial cell	2						1		1
cardiac muscle cell	2						1			1
central memory CD8-positive, alpha-beta T cell		2	2
choroid plexus epithelial cell	2						1			1
effector CD4-positive, alpha-beta T cell		2	2
effector T cell		2	2
effector memory CD8-positive, alpha-beta T cell		2	2
gamma-delta T cell		2	2
kidney tubule cell		1					3
mature natural killer cell		2	2
memory B cell		2	2
memory T cell		2	2
memory regulatory T cell		2	2
naive regulatory T cell		2	2
pancreatic stellate cell				4
regulatory T cell		2	2
retinal pigment epithelial cell	2						1			1
skeletal muscle cell	2						1			1
gabaergic neuron			3
glutamatergic neuron			3
kidney glomerular epithelial cell		1					2
microglial cell/astrocyte			3
neutrophil	1	1						1
oligodendrocyte			3
renal cortical epithelial cell		1					1			1
CD4-positive, alpha-beta T cell								2
brain pericyte							1		1
cerebellar granule cell				2
co-expressing pancreatic endocrine cell				2
endothelial cell				2
enteroendocrine cell				2
glomerular endothelial cell		1					1
glomerular visceral epithelial cell							2
immature natural killer cell		1	1
mast cell				2
mesenchymal stem cell of adipose		1															1
myeloid dendritic cell		1	1
natural killer cell		1	1
pancreatic epsilon cell				2
plasma cell		1	1
plasmacytoid dendritic cell		1	1
unclassified exocrine cell				2
unclassified pancreatic endocrine cell				2
Heart fetal (cardiac muscle cell)			1
Liver fetal (hepatocyte)			1
Purkinje cell				1
activated CD4-positive, alpha-beta T cell								1
adult endothelial progenitor cell								1
alternatively activated macrophage								1
astrocyte of the hippocampus							1
cardiac atrium fibroblast		1
cardiac ventricle fibroblast		1
chondrocytes									1
embryonic stem cell		1
endothelial cell of coronary artery		1
endothelial cell of hepatic sinusoid									1
erythroblast								1
hepatic stellate cell							1
inflammatory macrophage								1
kidney capillary endothelial cell							1
megakaryocyte								1
mesangial cell		1
pericardium fibroblast		1
smooth muscle cell of the brain vasculature							1
smooth muscle cell of the coronary artery		1
in vitro differentiated cells
adipocyte	45	5	8				1							1
cardiomyocytes		59
embryonic stem cell	28	7	6					1
neural progenitor cell	21	7	10
cardiac precursors (cardiac muscle cell)		19	1						1
pancreatic endoderm	15	4										1
hepatocyte	13
cardiomyocytes (cardiac muscle cell)		3	1	2				2	2
definitive endodermal cell	6	2										1
induced pluripotent stem cell		9
primitive gut cell	6	2										1
Pancreatic progenitors (progenitor cell of endocrine pancreas)			5
chondrocyte			5
endocrine cell	3	2
posterior foregut	3	2
Hepatic endoderm	4
Posterior foregut	3											1
immature adipocyte		2	2
lymphocyte of B lineage (iPSC)		1						1	1
osteoblast			1											1
pancreatic PP cell	2
preadipocyte		1	1
Progenitor cell of Hypothalamus (neural progenitor cell)			1
cardiac fibroblast		1
endothelial cell		1
hematopoietic multipotent progenitor cell		1
intermediate cardiomyocytes		1
intermediate endothelial cell		1
intermediate smooth muscle cell		1
islet precursor cell		1
mesodermal cell (lineage marker-negative)		1
mesodermal cell (pacemaker intermediate)		1
neuron cell of Hypothalamus (neuron)			1
smooth muscle cell		1
stem cell		1
white fat cell								1
cell line
HepG2	81	14	1			1		2	2				2
EndoC_BH1	14	33	19						1		6			2	3	2			1
smooth muscle cell of the coronary artery	2	52	8
Panc1	13						1		1
GM12878	9		1
H1-hESC		8
RCC 7860 vector	1	1						1
EndoC-BH1
HEK293T													2
RCC 7860 HIF1a re-expression	1	1
RCC 7860 HIF2a over-expression	1	1
early embryonic cell		2
glomerular visceral epithelial cell		1					1
MCF-7								1
MIN6
RCC 7860 VHL								1
Synthesized DNA													1
fibroblast cell line								1
iPSC derived cell line	1
stem cell
hESC	3											1
SB Ad3.1																		1		1
mesenchymal stem cell								1
mesendoderm								1
neural progenitor cell (neural stem cell)								1
trophoblast								1

Experiment Matrix

Assay

Assay category

Target of assay

Date released

Available data

Organism

Biosample type

Organ

Project

Genome assembly (visualization)

Lab

Audit category:

Audit category:

Audit category:

target.investigated_as!

biosample_type!

1734 results