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TF ChIP-seq Pipeline 2 (ENCODE replicated)

  • Status: active
Title
TF ChIP-seq Pipeline 2 (ENCODE replicated)
Assays
ChIP-seq, Mint-ChIP-seq
Description
Adopted ENCODE Transcription factor ChIP-seq pipeline 2 (replicated)
Lab
AMP-T2D consortium
Award PI
T2D AMP Consortium
Pipeline Type
github_readme
Pipeline Chain
/pipelines/DPL608JFY/
Pipeline Output
fold change over control, signal p-value, peaks, Replicated datasets only(conservative IDR peaks, optimal IDR peaks)
Submitter comment
Adopted ENCODE Transcription factor ChIP-seq pipeline 2 (replicated)

Pipeline schematic