Search – Common Metabolic Diseases Genome Atlas

Showing 10 of 10 results

Publication
released
Combining SNP-to-gene linking strategies to identify disease genes and assess disease omnigenicity
Steven Gazal, Omer Weissbrod, Farhad Hormozdiari, et al.
Nature Genetics. 2022-06-06;(2022)
- doi:10.1101/2021.08.02.21261488
URL: https://doi.org/10.5281/zenodo.6354007
Data summary: The list of 19,995 genes, summary statistics of the 63 independent traits, training and validation…
Data summary: Links for all data sets used to create S2G strategies are provided in Supplementary Table 26.
URL: http://www.ukbiobank.ac.uk/
Data summary: Access to the UK Biobank resource is available via application
URL: https://www.ebi.ac.uk/gwas/api/search/downloads/full
Data summary: The GWAS Catalog is available
URL: https://raw.githubusercontent.com/opentargets/genetics-gold-standards/master/gold_standards/processed/gwas_gold_standards.191108.tsv
Data summary: Open Targets SNP–gene pairs are available
URL: https://www.dropbox.com/s/kz2c49rpm2yanf5/all_byCS_rev1.txt?dl=0
Data summary: SNP–gene pairs from ref48 are available
URL: https://alkesgroup.broadinstitute.org/cS2G/code
Data summary: The code to estimate precision and recall of S2G strategies and the code to create combined S2G…
URL: https://doi.org/10.5281/zenodo.6415925
Data summary: The code to estimate precision and recall of S2G strategies and the code to create combined S2G…
Publication
released
Landscape of stimulation-responsive chromatin across diverse human immune cells
Diego Calderon, Michelle L. T. Nguyen, Anja Mezger, et al.
Nature Genetics. 2019-9-30;51:1494–1505.
Publication
released
Chromatin activity at GWAS loci identifies T cell states driving complex immune diseases
Blagoje Soskic, Eddie Cano-Gamez, Deborah J. Smyth, et al.
Nature Genetics. 2019-9-23;51:1486–1493.
Publication
released
The impact of proinflammatory cytokines on the β-cell regulatory landscape provides insights into the genetics of type 1 diabetes
Mireia Ramos-Rodríguez, Helena Raurell-Vila, Maikel L. Colli, et al.
Nature Genetics. 2019-11-01;51:1588–1595.
- doi:10.1038/s41588-019-0524-6
- PMID:31676868
Publication
released
A compendium of promoter-centered long-range chromatin interactions in the human genome
Inkyung Jung, Anthony Schmitt, Yarui Diao, et al.
Nature Genetics. 2019-09-09;51:1442–1449.
- doi:10.1038/s41588-019-0494-8
- PMID:31501517
URL: https://www.nature.com/articles/s41588-019-0494-8
Publication
released
Human Pancreatic Islet Three-dimensional Chromatin Architecture Provides Insights into The Genetics of Type 2 Diabetes
Irene Miguel-Escalada, Silvia Bonàs-Guarch, Inês Cebola, et al.
Nature Genetics. 2019-06-28;51:1137-1148.
- doi:10.1038/s41588-019-0457-0
- PMID:31253982
URL: https://www.nature.com/articles/s41588-019-0457-0
Publication
released
Retinal transcriptome and eQTL analyses identify genes associated with age-related macular degeneration
Rinki Ratnapriya, Olukayode A. Sosina, Margaret R. Starostik, et al.
Nature Genetics. 2019-02-11;51:606–610.
- doi:10.1038/s41588-019-0351-9
- PMID:30742112
Publication
released
Single-cell RNA sequencing identifies celltype-specific cis-eQTLs and co-expression QTLs
Monique G P van der Wijst, Harm Brugge, Dylan H de Vries, et al.
Nature Genetics. 2018-4-2;50:493–497.
Publication
released
An Atlas of Genetic Influences on Osteoporosis in Humans and Mice
John A. Morris, John P. Kemp, Scott E. Youlten, et al.
Nature Genetics. 2018-12-31;51(2):258-266.
URL: https://www.nature.com/articles/s41588-018-0302-x
Publication
released
Pancreatic Islet Enhancer Clusters Enriched In Type 2 Diabetes Risk–associated Variants
Lorenzo Pasquali, Kyle J. Gaulton, Santiago A. Rodríguez-Seguí, et al.
Nature Genetics. 2014-02;46(2):136-143.
- doi:10.1038/ng.2870
- PMID:24413736

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Showing 10 of 10 results