{
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"aliases": [
"amp-t2d-consortium:GTEx_replicate_GTEx-11I78-0726-SM-5A5M1"
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"biological_replicate_number": 13,
"experiment": {
"documents": [],
"submitted_by": "/users/1396e9a3-22b2-42e4-9b19-b874944f9981/",
"internal_tags": [],
"accession": "DSR626HCQ",
"biosample_term_name": "ascending aorta",
"supersedes": [],
"biosample_type": "tissue",
"dbxrefs": [],
"aliases": [
"amp-t2d-consortium:GTEx_experiment_arteryaorta"
],
"assay_term_name": "RNA-seq",
"related_files": [],
"date_created": "2019-12-18T19:19:30.324338+00:00",
"award": "/awards/U01DK100554/",
"description": "GTEx RNA-seq experiment for arteryaorta",
"possible_controls": [],
"references": [],
"schema_version": "16",
"biosample_term_id": "UBERON:0001496",
"status": "released",
"date_released": "2020-02-05",
"lab": "/labs/amp-t2d-consortium/",
"alternate_accessions": [],
"internal_status": "unreviewed",
"assay_term_id": "OBI:0001271",
"biosample_synonyms": [
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],
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],
"system_slims": [
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],
"developmental_slims": [
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],
"@id": "/experiments/DSR626HCQ/",
"@type": [
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],
"uuid": "071f881d-3640-4e29-8768-51b1b0095200",
"original_files": [
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"files": [
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],
"biosample_summary": "ascending aorta female adult (20-29 years) and female adult (30-39 years) and female adult (40-49 years) and female adult (50-59 years) and female adult (60-69 years) and female adult (70-79 years) and male adult (20-29 years) and male adult (30-39 years) and male adult (40-49 years) and male adult (50-59 years) and male adult (60-69 years) and male adult (70-79 years)",
"assay_slims": [
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],
"assay_title": "total RNA-seq",
"category_slims": [
"transcription profiling"
],
"type_slims": [
"transcription profiling assay"
],
"objective_slims": [
"transcription profiling identification objective"
],
"related_series": [],
"superseded_by": [],
"replication_type": "anisogenic"
},
"date_created": "2019-12-18T19:39:49.039014+00:00",
"status": "released",
"library": {
"dbxrefs": [],
"award": "/awards/U01DK100554/",
"date_created": "2019-12-18T19:20:57.339839+00:00",
"strand_specificity": false,
"biosample": {
"references": [],
"donor": {
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"alternate_accessions": [],
"sex": "female",
"award": "/awards/U01DK100554/",
"date_created": "2019-12-11T22:45:13.080352+00:00",
"accession": "DDO547TUE",
"aliases": [
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],
"siblings": [],
"age_units": "year",
"life_stage": "adult",
"documents": [],
"schema_version": "11",
"age": "50-59",
"status": "released",
"submitted_by": "/users/1396e9a3-22b2-42e4-9b19-b874944f9981/",
"organism": {
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"taxon_id": "9606",
"status": "current",
"schema_version": "4",
"name": "human",
"@id": "/organisms/human/",
"@type": [
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],
"uuid": "2e5a2453-8f03-45ee-82e4-9b7e6c963f43"
},
"health_status": "Ventilator Case",
"lab": "/labs/amp-t2d-consortium/",
"references": [],
"@id": "/human-donors/DDO547TUE/",
"@type": [
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],
"uuid": "b077abf0-3af1-4544-ab45-8301b91f920e",
"characterizations": [],
"children": []
},
"accession": "DBS916AMW",
"date_created": "2019-12-18T18:59:00.431765+00:00",
"biosample_term_id": "UBERON:0001496",
"documents": [],
"description": "ascending aorta GTEx biosample",
"status": "released",
"organism": "/organisms/human/",
"aliases": [
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],
"submitted_by": "/users/1396e9a3-22b2-42e4-9b19-b874944f9981/",
"biosample_term_name": "ascending aorta",
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"lab": "/labs/amp-t2d-consortium/",
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"internal_tags": [],
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"biosample_type": "tissue",
"schema_version": "20",
"alternate_accessions": [],
"biosample_synonyms": [
"ascending thoracic aorta",
"pars ascendens aortae"
],
"organ_slims": [
"blood vessel",
"vasculature"
],
"system_slims": [
"circulatory system"
],
"developmental_slims": [
"mesoderm"
],
"@id": "/biosamples/DBS916AMW/",
"@type": [
"Biosample",
"Item"
],
"uuid": "711196a0-decd-4b33-b079-d035199f9aee",
"sex": "female",
"age": "50-59",
"age_units": "year",
"health_status": "Ventilator Case",
"life_stage": "adult",
"applied_modifications": [],
"characterizations": [],
"parent_of": [],
"age_display": "50-59 year",
"summary": "Homo sapiens ascending aorta tissue female adult (50-59 years)"
},
"documents": [],
"aliases": [
"amp-t2d-consortium:GTEx_library_GTEx-11I78-0726-SM-5A5M1"
],
"lab": "/labs/amp-t2d-consortium/",
"spikeins_used": [],
"nucleic_acid_term_name": "RNA",
"treatments": [],
"submitted_by": "/users/1396e9a3-22b2-42e4-9b19-b874944f9981/",
"status": "released",
"alternate_accessions": [],
"schema_version": "8",
"accession": "DLB550QPX",
"@id": "/libraries/DLB550QPX/",
"@type": [
"Library",
"Item"
],
"uuid": "5ed86b23-b5d6-4b76-9548-98d2c22e6403",
"nucleic_acid_term_id": "SO:0000356"
},
"technical_replicate_number": 1,
"schema_version": "9",
"@id": "/replicates/1e5a3cf3-ba48-47e3-9d5d-1b4ed0021019/",
"@type": [
"Replicate",
"Item"
],
"uuid": "1e5a3cf3-ba48-47e3-9d5d-1b4ed0021019",
"@context": "/policy/",
"audit": {
"INTERNAL_ACTION": [
{
"category": "validation error",
"detail": "Object /human-donors/DDO547TUE/ has schema error {'dbxrefs': [], 'parents': [], 'alternate_accessions': [], 'sex': 'female', 'award': 'a02de4e0-42fc-457e-ae99-9b0707f10733', 'date_created': '2019-12-11T22:45:13.080352+00:00', 'accession': 'DDO547TUE', 'aliases': ['amp-t2d-consortium:GTEx_donor_GTEx-11I78'], 'siblings': [], 'age_units': 'year', 'life_stage': 'adult', 'documents': [], 'schema_version': '11', 'age': '50-59', 'status': 'released', 'submitted_by': '1396e9a3-22b2-42e4-9b19-b874944f9981', 'organism': '2e5a2453-8f03-45ee-82e4-9b7e6c963f43', 'health_status': 'Ventilator Case', 'lab': '8c7ee408-a8e4-4d79-9cc7-10f4b2bc5a4c', 'references': [], 'uuid': 'b077abf0-3af1-4544-ab45-8301b91f920e'} is not valid under any of the given schemas",
"level": 30,
"level_name": "INTERNAL_ACTION",
"path": "/human-donors/DDO547TUE/",
"name": "audit_item_schema"
}
]
}
}