{
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],
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"aliases": [
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],
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],
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],
"biosample_summary": "substantia nigra female adult (20-29 years) and female adult (30-39 years) and female adult (40-49 years) and female adult (50-59 years) and female adult (60-69 years) and female adult (70-79 years) and male adult (20-29 years) and male adult (30-39 years) and male adult (40-49 years) and male adult (50-59 years) and male adult (60-69 years) and male adult (70-79 years)",
"assay_slims": [
"Transcription"
],
"assay_title": "total RNA-seq",
"category_slims": [
"transcription profiling"
],
"type_slims": [
"transcription profiling assay"
],
"objective_slims": [
"transcription profiling identification objective"
],
"related_series": [],
"superseded_by": [],
"replication_type": "anisogenic"
},
"library": {
"documents": [],
"alternate_accessions": [],
"aliases": [
"amp-t2d-consortium:GTEx_library_GTEx-131XH-0011-R2b-SM-5DUVY"
],
"dbxrefs": [],
"accession": "DLB107BCP",
"biosample": {
"genetic_modifications": [],
"internal_tags": [],
"description": "substantia nigra GTEx biosample",
"treatments": [],
"submitted_by": "/users/1396e9a3-22b2-42e4-9b19-b874944f9981/",
"biosample_term_id": "UBERON:0002038",
"aliases": [
"amp-t2d-consortium:GTEx_biosample_GTEx-131XH-0011-R2b-SM-5DUVY"
],
"date_created": "2019-12-18T18:38:41.339683+00:00",
"source": "/sources/unknown/",
"status": "released",
"award": "/awards/U01DK100554/",
"dbxrefs": [],
"references": [],
"biosample_term_name": "substantia nigra",
"donor": {
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"life_stage": "adult",
"age": "50-59",
"status": "released",
"schema_version": "11",
"alternate_accessions": [],
"sex": "male",
"dbxrefs": [],
"parents": [],
"age_units": "year",
"accession": "DDO002CZF",
"health_status": "Fast death of natural causes",
"siblings": [],
"date_created": "2019-12-11T22:46:31.899698+00:00",
"documents": [],
"award": "/awards/U01DK100554/",
"lab": "/labs/amp-t2d-consortium/",
"aliases": [
"amp-t2d-consortium:GTEx_donor_GTEx-131XH"
],
"organism": {
"scientific_name": "Homo sapiens",
"taxon_id": "9606",
"status": "current",
"schema_version": "4",
"name": "human",
"@id": "/organisms/human/",
"@type": [
"Organism",
"Item"
],
"uuid": "2e5a2453-8f03-45ee-82e4-9b7e6c963f43"
},
"references": [],
"@id": "/human-donors/DDO002CZF/",
"@type": [
"HumanDonor",
"Donor",
"Item"
],
"uuid": "96fada9d-f5f6-4ddd-a60a-90cc8a3bbe95",
"characterizations": [],
"children": []
},
"accession": "DBS051DMO",
"biosample_type": "tissue",
"documents": [],
"organism": "/organisms/human/",
"alternate_accessions": [],
"schema_version": "20",
"lab": "/labs/amp-t2d-consortium/",
"biosample_synonyms": [
"Entire substantia nigra",
"substancia nigra",
"nucleus of basis pedunculi",
"Soemmering's substance"
],
"organ_slims": [
"brain"
],
"system_slims": [
"central nervous system"
],
"developmental_slims": [
"ectoderm"
],
"@id": "/biosamples/DBS051DMO/",
"@type": [
"Biosample",
"Item"
],
"uuid": "d2d0f9af-35d6-4e29-a39b-8323fee4b366",
"sex": "male",
"age": "50-59",
"age_units": "year",
"health_status": "Fast death of natural causes",
"life_stage": "adult",
"applied_modifications": [],
"characterizations": [],
"parent_of": [],
"age_display": "50-59 year",
"summary": "Homo sapiens substantia nigra tissue male adult (50-59 years)"
},
"schema_version": "8",
"status": "released",
"submitted_by": "/users/1396e9a3-22b2-42e4-9b19-b874944f9981/",
"date_created": "2019-12-18T18:47:24.096366+00:00",
"strand_specificity": false,
"treatments": [],
"lab": "/labs/amp-t2d-consortium/",
"spikeins_used": [],
"nucleic_acid_term_name": "RNA",
"award": "/awards/U01DK100554/",
"@id": "/libraries/DLB107BCP/",
"@type": [
"Library",
"Item"
],
"uuid": "e4e46e7f-d891-4a3e-8537-5a695f82eda0",
"nucleic_acid_term_id": "SO:0000356"
},
"@id": "/replicates/80ecfee2-8148-4d16-81ad-ab8e4c6535a1/",
"@type": [
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],
"uuid": "80ecfee2-8148-4d16-81ad-ab8e4c6535a1",
"@context": "/policy/",
"audit": {
"INTERNAL_ACTION": [
{
"category": "validation error",
"detail": "Object /human-donors/DDO002CZF/ has schema error {'submitted_by': '1396e9a3-22b2-42e4-9b19-b874944f9981', 'life_stage': 'adult', 'age': '50-59', 'status': 'released', 'schema_version': '11', 'alternate_accessions': [], 'sex': 'male', 'dbxrefs': [], 'parents': [], 'age_units': 'year', 'accession': 'DDO002CZF', 'health_status': 'Fast death of natural causes', 'siblings': [], 'date_created': '2019-12-11T22:46:31.899698+00:00', 'documents': [], 'award': 'a02de4e0-42fc-457e-ae99-9b0707f10733', 'lab': '8c7ee408-a8e4-4d79-9cc7-10f4b2bc5a4c', 'aliases': ['amp-t2d-consortium:GTEx_donor_GTEx-131XH'], 'organism': '2e5a2453-8f03-45ee-82e4-9b7e6c963f43', 'references': [], 'uuid': '96fada9d-f5f6-4ddd-a60a-90cc8a3bbe95'} is not valid under any of the given schemas",
"level": 30,
"level_name": "INTERNAL_ACTION",
"path": "/human-donors/DDO002CZF/",
"name": "audit_item_schema"
}
]
}
}