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Assay
1
RNA-seq
Pipeline status
1
active
Pipeline groups
1
RNA-seq Pipeline Cebola Lab
Software
4
Samtools
4
deepTools
4
fastp
3
BEDTools
3
Bowtie 2
3
MACS2
bedGraphToBigWig
1
Picard
1
SALMON
1
STAR
Developed by
12
AMP-T2D consortium
5
Kyle Gaulton, UCSD
1
Ines Cebola, Imperial College London
1
Patrick T. Ellinor, Broad
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bedGraphToBigWig
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Pipeline
DPL450NWL
active
RNA-seq Pipeline Cebola Lab
Assays:
RNA-seq
Software:
fastp, STAR, SALMON, Samtools, deepTools