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Assay
1
ATAC-seq
1
ChIP-seq
1
DNase-seq
Pipeline status
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active
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Software
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MACS2
6
BEDTools
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5
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4
Bowtie 2
2
BWA
2
Irreproducible Discovery Rate (IDR)
2
bedGraphToBigWig
2
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overlap_peaks.py
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getVariantOverlap.py
1
makeCandidateRegions.py
1
predict.py
1
run.neighborhoods.py
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Pipeline
DPL010CNP
active
Activity by Contact
Assays:
ATAC-seq, ChIP-seq, DNase-seq
Software:
MACS2, BEDTools, makeCandidateRegions.py, run.neighborhoods.py, predict.py, getVariantOverlap.py