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Citing CMDGA
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Annotation type
1
sQTL
Annotation Category
Gene expression levels
1
Genetic variant effects
Annotation type Category
1
RNA-seq
File set status
1
released
Genome assembly (visualization)
hg19
GRCh38
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
6
islet of Langerhans
2
adipose-derived stem cell
2
articular chondrocyte
2
differentiating adipose-derived stem cell
1
HepG2
1
Pancreatic islets
1
Progenitor cell of Hypothalamus (neural progenitor cell)
1
caudate nucleus
1
embryonic stem cell
1
endothelial cell of umbilical vein
1
globus pallidus
1
glomerular endothelial cell
1
hepatic stellate cell
1
kidney capillary endothelial cell
1
kidney glomerular epithelial cell
1
left renal cortex interstitium
1
liver
1
medulla oblongata
1
midbrain
1
middle frontal gyrus
1
monocyte
1
myocyte
1
neural progenitor cell
1
neuron cell of Hypothalamus (neuron)
1
omental fat pad
1
pons
1
putamen
1
right kidney
1
right renal cortex interstitium
1
skeletal muscle myoblast
1
subcutaneous adipose tissue
1
superior temporal gyrus
Life stage
1
adult
Date released
1
May, 2021
Software used
1
limix
1
sqtlseeker
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
annotation_category!
Gene expression levels
assembly!
GRCh38
hg19
biosample_term_name!
CD8-positive, alpha-beta T cell
Showing 1 of 1 results
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matrix-icon
FileSet
DSR337BHM
released
Annotation file set
: PSI splicing quantitative trait loci (sQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP