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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
Annotation Category
Gene expression levels
1
cis-regulatory elements
Annotation type Category
1
DNase-seq
Available data
1
bed bed3+
1
bigWig
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
tissue
Biosample term
89
monocyte
22
retina
20
pigmented layer of retina
18
CD8-positive, alpha-beta T cell
11
islet of Langerhans
11
subcutaneous adipose tissue
10
common myeloid progenitor, CD34-positive
10
endothelial cell of hepatic sinusoid
10
omental fat pad
10
tibial nerve
9
liver
8
CD4-positive, alpha-beta T cell
8
ascending aorta
8
body of pancreas
8
caudate nucleus
8
heart left ventricle
8
hematopoietic multipotent progenitor cell
8
pancreas
7
coronary artery
7
putamen
7
spleen
7
substantia nigra
7
tibial artery
6
Ammon's horn
6
adrenal gland
6
cerebellum
6
naive thymus-derived CD4-positive, alpha-beta T cell
6
right atrium auricular region
6
stomach
5
B cell
5
aorta
5
frontal cortex
5
hepatocyte
5
mature neutrophil
5
neutrophil
5
right lobe of liver
5
subcutaneous abdominal adipose tissue
5
temporal lobe
4
C1 segment of cervical spinal cord
4
MCF-7
4
Peyer's patch
4
amygdala
4
angular gyrus
4
anterior cingulate cortex
4
cerebellum (Hemisphere)
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
esophagus squamous epithelium
4
gastrocnemius medialis
4
gastrocnemius medialis(Muscle - Skeletal)
4
gastroesophageal sphincter
4
glutamatergic neuron
4
hypothalamus
4
left ventricle myocardium
4
lower leg skin
4
nucleus accumbens
4
pancreatic alpha cell
4
pancreatic beta cell
4
peripheral blood mononuclear cell
4
sigmoid colon
4
thyroid gland
4
transverse colon
4
upper lobe of left lung
3
A549
3
CD14-positive monocyte
3
MCF 10A
3
adipose tissue
3
breast epithelium
3
endocrine pancreas
3
esophagus muscularis mucosa
3
globus pallidus
3
inflammatory macrophage
3
kidney
3
kidney glomerular epithelial cell
3
layer of hippocampus
3
middle frontal gyrus
3
natural killer cell
3
ovary
3
parathyroid adenoma
3
psoas muscle
3
right cardiac atrium
3
skeletal muscle tissue
3
suprapubic skin
3
thoracic aorta
2
cardiac fibroblast
2
AG10803
2
CD14-positive, CD16-negative classical monocyte
2
GM12878
2
HeLa-S3
2
LNCAP
2
T-cell
2
T-helper 1 cell
2
alternatively activated macrophage
2
blood
2
cardiomyocytes (cardiac muscle cell)
2
cerebellar cortex
2
cingulate gyrus
2
colonic mucosa
2
dermis blood vessel endothelial cell
2
duodenal mucosa
2
endothelial cell
2
esophagus
2
fibroblast
2
fibroblast of breast
2
fibroblast of lung
2
heart right ventricle
2
hepatic stellate cell
2
kidney tubule cell
2
lung
2
lymphocyte of B lineage (iPSC)
2
mammary epithelial cell
2
medulla oblongata
2
mesenchymal stem cell
2
midbrain
2
middle frontal area 46
2
mucosa of rectum
2
muscle layer of colon
2
muscle layer of duodenum
2
myoepithelial cell of mammary gland
2
pancreatic delta cell
2
pancreatic polypeptide-secreting cell
2
pons
2
prostate gland
2
skeletal muscle satellite cell
2
small intestine
2
stomach smooth muscle
2
superior temporal gyrus
2
testis
2
uterus
2
vagina
1
A-673 cell
1
A172
1
ACC112
1
ACHN
1
AG09309
1
AG09319
1
C4-2B
1
Caco-2
1
Caki2
1
DOHH2
1
GM04503
1
GM04504
1
GM23248
1
GM23338
1
H4
1
H54
1
HAP-1
1
HCT116
1
HL-60
1
HS-27A
1
HS-5
1
HT-29
1
HT1080
1
HepG2
1
Ishikawa
1
K562
1
KBM-7
1
KMS-11
1
Karpas-422
1
LHCN-M2
1
LNCaP clone FGC
1
LoVo
1
Loucy
1
M059J
1
MM.1S
1
NB4
1
NCI-H226
1
NCI-H929
1
OCI-LY1
1
OCI-LY3
1
OCI-LY7
1
PC-3
1
RCC
1
RCC 7860
1
RPMI7951
1
RPMI8226
1
RWPE1
1
RWPE2
1
SJSA1
1
SK-MEL-5
1
SU-DHL-6
1
SW480
1
T cell
1
T-helper 2 cell
1
T47D
1
VCaP
1
adipocyte
1
bipolar neuron
1
cardiac fibroblast
1
cell
1
cerebrospinal fluid
1
fibroblast of dermis
1
gabaergic neuron
1
glomerular visceral epithelial cell
1
heart
1
iPS-11a
1
iPS-15b
1
iPS-18a
1
iPS-18c
1
iPS-20b
1
kidney distal convoluted tubule epithelial cell
Organ
1
heart
Life stage
19
embryonic
3
fetal
1
adult
1
child
1
young adult
Date released
September, 2022
1
January, 2020
Software used
1
macs
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
annotation_category!
Gene expression levels
month_released!
September, 2022
Showing 1 of 1 results
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Download
FileSet
DSR994QRK
released
Annotation file set
: Accessible chromatin annotation of heart adult from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP