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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
2
histone modifications
1
binding sites
Annotation Category
5
cis-regulatory elements
Gene expression levels
Annotation type Category
3
ChIP-seq
2
ATAC-seq
Available data
5
bed bed3+
2
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
Organism
3
Homo sapiens
Biosample type
5
primary cell
Biosample term
115
monocyte
54
common myeloid progenitor, CD34-positive
47
CD8-positive, alpha-beta T cell
41
B cell
33
endothelial cell
32
CD4-positive, alpha-beta memory T cell
32
fibroblast
31
CD14-positive monocyte
29
macrophage
24
pericyte cell
22
CD8-positive, alpha-beta memory T cell
22
T cell
22
natural killer cell
21
hepatocyte
21
regulatory T cell
21
smooth muscle cell
20
endothelial cell of umbilical vein
20
mononuclear cell
19
foreskin keratinocyte
18
trophoblast cell
17
keratinocyte
16
T-helper 1 cell
16
astrocyte
16
fibroblast of lung
16
foreskin fibroblast
15
CD4-positive, alpha-beta T cell
15
neutrophil
15
osteoblast
15
skeletal muscle myoblast
14
T-helper 17 cell
14
T-helper 2 cell
13
mammary epithelial cell
13
mammary gland epithelial cell
13
naive thymus-derived CD4-positive, alpha-beta T cell
13
neurosphere
13
pancreatic ductal cell
12
bronchial epithelial cell
12
endothelial cell of hepatic sinusoid
12
excitatory neuron
12
fibroblast of cardiac tissue
12
fibroblast of dermis
12
pancreatic beta cell
11
erythroblast
11
pancreatic alpha cell
11
skeletal muscle satellite cell
10
dermis blood vessel endothelial cell
10
pancreatic acinar cell
10
pancreatic delta cell
10
retinal pigment epithelial cell
9
epithelial cell of prostate
9
hepatic stellate cell
9
kidney tubule cell
9
mature neutrophil
9
naive T cell
9
skin fibroblast
8
fibroblast of breast
8
fibroblast of mammary gland
8
fibroblast of pulmonary artery
8
fibroblast of villous mesenchyme
8
glutamatergic neuron
8
mast cell
8
myoepithelial cell of mammary gland
7
CD1c-positive myeloid dendritic cell
7
cardiac muscle cell
7
choroid plexus epithelial cell
7
endothelial cell of lymphatic vessel
7
epithelial cell of proximal tubule
7
glomerular endothelial cell
7
kidney glomerular epithelial cell
7
luminal epithelial cell of mammary gland
7
pulmonary artery endothelial cell
7
renal cortical epithelial cell
7
skeletal muscle fiber
7
type II pneumocyte
6
T-cell
6
astrocyte of the cerebellum
6
astrocyte of the hippocampus
6
colon epithelial cell
6
cortical cell of adrenal gland
6
dermis lymphatic vessel endothelial cell
6
enterocyte
6
epithelial cell of esophagus
6
foreskin melanocyte
6
glomerular visceral epithelial cell
6
kidney epithelial cell
6
memory B cell
6
mesenchymal stem cell
6
myofibroblast cell
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
olfactory receptor cell
6
peripheral blood mononuclear cell
6
skeletal muscle cell
6
smooth muscle cell of the brain vasculature
6
type I muscle cell
6
type II muscle cell
5
cardiac fibroblast
5
CD14-positive, CD16-negative classical monocyte
5
CD4-positive helper T cell
5
adipocyte
5
alternatively activated macrophage
5
basal cell
5
brain microvascular endothelial cell
5
endocardial cell
5
fibroblast of peridontal ligament
5
fibroblast of the aortic adventitia
5
gabaergic neuron
5
inhibitory neuron
5
iris pigment epithelial cell
5
kidney capillary endothelial cell
5
lung microvascular endothelial cell
5
naive B cell
5
non-pigmented ciliary epithelial cell
5
plasma cell
5
tracheal epithelial cell
4
activated CD4-positive, alpha-beta T cell
4
acute myeloid leukemia cell
4
aortic adventitial fibroblast
4
aortic endothelial cell
4
astrocyte of the spinal cord
4
blood vessel smooth muscle cell
4
cardiac fibroblast
4
enteric smooth muscle cell
4
fibroblast of gingiva
4
fibroblast of the conjunctiva
4
inflammatory macrophage
4
megakaryocyte
4
mesothelial cell
4
neuronal stem cell
4
pancreatic polypeptide-secreting cell
4
preadipocyte
4
renal epithelial cell
4
smooth muscle cell of the esophagus
4
stromal cell of bone marrow
4
type I pneumocyte
3
Ishikawa
3
T follicular helper cell
3
Th1 cell
3
Th17 cell
3
activated CD8-positive, alpha-beta T cell
3
amnion mesenchymal stem cell
3
amniotic stem cell
3
blood cell
3
bone marrow cell
3
brain pericyte
3
ciliated cell
3
club cell
3
enteric neuron
3
epidermal melanocyte
3
epithelial cell of amnion
3
erythroid cell
3
goblet cell
3
mammary stem cell
3
microglial cell
3
mononuclear cell of bone marrow
3
myotube
3
naive t cell
3
neoplastic cell
3
oligodendrocyte
3
oligodendrocyte precursor cell
3
pancreatic A cell
3
pancreatic stellate cell
3
parietal cell
3
peptic cell
3
peripheral blood stem cell
3
plasmacytoid dendritic cell
3
pre-B acute lymphoblastic leukemia cell
3
pulmonary interstitial fibroblast
3
regular cardiac myocyte
3
schwann cell
3
thyroid follicular cell
3
type B pancreatic cell
2
Adipose stromal cell
2
B-lymphocyte
2
CD34-positive, CD38-negative hematopoietic stem cell
2
Muller cell
2
Rhabdoid Tumor of the Kidney
2
Schwann cell
2
Th2 cell
2
alveolar macrophage
2
articular chondrocyte
2
basal cell of epidermis
2
capillary endothelial cell
2
cardiac endothelial cell
2
cardiac muscle myoblast
2
central memory CD8-positive, alpha-beta T cell
2
cholangiocyte
2
chronic lymphocytic leukemia cell
2
colon goblet cell
2
columnar chondrocyte
2
conventional dendritic cell
2
dermis microvascular lymphatic vessel endothelial cell
2
eccrine cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
enterochromaffin-like cell
2
enterocyte of epithelium of small intestine
2
erythrocyte
2
erythroid progenitor cell
2
extracellular matrix secreting cell
Date released
3
February, 2021
2
May, 2020
Software used
3
macs
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
annotation_category!
Gene expression levels
Showing 5 of 5 results
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Download
FileSet
DSR889ERK
released
Annotation file set
: Histone modifications annotation for Blood PreB-ALL from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR235DEG
released
Annotation file set
: Histone modifications annotation for Blood Pre-B_ALL_ from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR932MER
released
Annotation file set
: Binding sites annotation for Blood Pre-B_ALL_ from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR507SPZ
released
Annotation file set
: GSE118189 ATACseq accessible chromatin of normal effector CD4-positive, alpha-beta T cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR399KPT
released
Annotation file set
: GSE118189 ATACseq accessible chromatin of LPS-stimulated effector CD4-positive, alpha-beta T cell
Lab:
AMP-T2D consortium
Project:
AMP