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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
2
target gene predictions
Annotation Category
2
Target gene links
2
cis-regulatory elements
Annotation type Category
4
ChIP-seq
4
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
38
heart
38
stomach
32
brain
32
lung
32
muscle of arm
30
small intestine
28
adrenal gland
28
kidney
28
placenta
26
common myeloid progenitor, CD34-positive
26
large intestine
26
left lung
26
muscle of back
26
muscle of leg
22
right lung
22
thymus
20
hematopoietic multipotent progenitor cell
20
right kidney
18
CD4-positive, alpha-beta memory T cell
18
left kidney
18
renal cortex interstitium
18
renal pelvis
16
B cell
15
liver
14
CD8-positive, alpha-beta memory T cell
14
spinal cord
12
adipose tissue
12
mononuclear cell
12
spleen
10
heart left ventricle
10
sigmoid colon
10
trophoblast cell
8
CD14-positive monocyte
8
T cell
8
body of pancreas
8
chorionic villus
8
endocrine pancreas
8
foreskin keratinocyte
8
gastrocnemius medialis
8
muscle of trunk
8
neural progenitor cell
8
ovary
8
psoas muscle
8
thyroid gland
8
transverse colon
6
Peyer's patch
6
T-helper 1 cell
6
T-helper 17 cell
6
T-helper 2 cell
6
caudate nucleus
6
chorion membrane
6
fibroblast of cardiac tissue
6
fibroblast of dermis
6
fibroblast of lung
6
heart right ventricle
6
layer of hippocampus
6
mammary gland epithelial cell
6
naive T cell
6
natural killer cell
6
neurosphere
6
regulatory T cell
6
retina
6
skeletal muscle tissue
6
testis
6
tibial nerve
6
upper lobe of left lung
4
Brodmann (1909) area 46
4
adipocyte
4
angular gyrus
4
aorta
4
ascending aorta
4
breast epithelium
4
bronchial epithelial cell
4
cerebellum
4
cingulate gyrus
4
colonic mucosa
4
coronary artery
4
dermis blood vessel endothelial cell
4
dermis lymphatic vessel endothelial cell
4
duodenal mucosa
4
endodermal cell
4
endothelial cell of umbilical vein
4
epithelial cell of prostate
4
esophagus
4
esophagus muscularis mucosa
4
esophagus squamous epithelium
4
eye
4
fibroblast of breast
4
frontal cortex
4
hepatocyte
4
keratinocyte
4
kidney tubule cell
4
left renal cortex interstitium
4
left renal pelvis
4
limb
4
lower leg skin
4
mesenchymal stem cell
4
mucosa of rectum
4
muscle cell
4
muscle layer of colon
4
muscle layer of duodenum
4
myoepithelial cell of mammary gland
4
neutrophil
4
omental fat pad
4
pancreas
4
parathyroid adenoma
4
prostate gland
4
right atrium auricular region
4
right renal cortex interstitium
4
right renal pelvis
4
skeletal muscle myoblast
4
skin fibroblast
4
stomach smooth muscle
4
substantia nigra
4
temporal lobe
4
thoracic aorta
4
tibial artery
4
tongue
4
trophoblast
4
urinary bladder
4
vagina
2
Ammon's horn
2
CD1c-positive myeloid dendritic cell
2
amnion
2
amnion mesenchymal stem cell
2
amniotic stem cell
2
arm bone
2
astrocyte
2
astrocyte of the cerebellum
2
astrocyte of the hippocampus
2
astrocyte of the spinal cord
2
bipolar neuron
2
brain microvascular endothelial cell
2
cardiac mesoderm primordium
2
cardiac muscle cell
2
cerebellar cortex
2
choroid plexus epithelial cell
2
ectodermal cell
2
embryonic facial prominence
2
epidermal melanocyte
2
epithelial cell of amnion
2
epithelial cell of esophagus
2
epithelial cell of proximal tubule
2
femur
2
fibroblast of gingiva
2
fibroblast of mammary gland
2
fibroblast of peridontal ligament
2
fibroblast of pulmonary artery
2
fibroblast of the aortic adventitia
2
fibroblast of the conjunctiva
2
fibroblast of villous mesenchyme
2
foreskin fibroblast
2
foreskin melanocyte
2
gastroesophageal sphincter
2
germinal center
2
germinal matrix
2
globus pallidus
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
hepatic stellate cell
2
inferior parietal cortex
2
iris pigment epithelial cell
2
islet of Langerhans
2
islet precursor cell
2
kidney capillary endothelial cell
2
kidney epithelial cell
2
kidney glomerular epithelial cell
2
left cardiac atrium
2
leg bone
2
luminal epithelial cell of mammary gland
2
lung microvascular endothelial cell
2
mammary stem cell
2
medulla oblongata
2
mesendoderm
2
mesodermal cell
2
midbrain
2
middle frontal gyrus
2
mucosa of stomach
2
neural cell
2
neuron
2
non-pigmented ciliary epithelial cell
2
occipital lobe
2
olfactory neurosphere cell line
2
osteoblast
2
pericyte cell
2
pons
2
pulmonary artery endothelial cell
2
putamen
2
rectum smooth muscle tissue
2
regular cardiac myocyte
2
renal cortical epithelial cell
2
retinal pigment epithelial cell
2
right cardiac atrium
2
right lobe of liver
2
skeletal muscle cell
2
skeletal muscle satellite cell
2
skin of body
2
smooth muscle cell
2
smooth muscle cell of the brain vasculature
2
stromal cell of bone marrow
Organ
4
esophagus
Life stage
4
adult
Date released
4
September, 2022
Software used
4
r
2
chromhmm
2
encode-ccres
1
nospecificsoft_customcode
1
qTLtools
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
annotation_category!
Gene expression levels
biosample_type!
cell line
Showing 4 of 4 results
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Download
FileSet
DSR904WOM
released
Annotation file set
: Candidate regulatory elements for BSS00318 esophagus from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR528ZIJ
released
Annotation file set
: Candidate regulatory elements for BSS00316 esophagus from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR539NEW
released
Annotation file set
: Target gene predictions for BSS00318 esophagus from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR478QNW
released
Annotation file set
: Target gene predictions for BSS00316 esophagus from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP