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Citing CMDGA
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Annotation type
4
gene expression
Annotation Category
4
Gene expression levels
Genetic variant effects
Annotation type Category
36
ChIP-seq
30
DNase-seq
7
snATAC-seq
4
RNA-seq
3
ATAC-seq
2
pCHi-C
1
H3K27ac ChIP-Seq
Available data
4
tsv
File set status
4
released
Organism
4
Homo sapiens
Biosample type
2
primary cell
1
in vitro differentiated cells
1
tissue
Biosample term
16
induced pluripotent stem cell
15
monocyte
11
EndoC_BH1
11
cardiomyocytes
11
islet of Langerhans
10
hepatocyte
8
H1-hESC
7
T-helper 1 cell
7
kidney
7
neural progenitor cell
7
regulatory T cell
6
T-helper 17 cell
6
subcutaneous adipose tissue
4
cardiac precursors (cardiac muscle cell)
4
endothelial cell of hepatic sinusoid
3
T-helper 2 cell
3
bone tissue
3
central memory CD8-positive, alpha-beta T cell
3
effector memory CD8-positive, alpha-beta T cell
3
endothelial cell
3
memory B cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
visceral abdominal adipose tissue
2
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
adipose tissue
2
body of pancreas
2
cardiomyocytes (cardiac muscle cell)
2
cerebellum
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
frontal cortex
2
gamma-delta T cell
2
heart
2
liver
2
mature natural killer cell
2
memory T cell
2
memory regulatory T cell
2
naive B cel
2
omental fat pad
2
osteoblast
2
right atrium auricular region
2
smooth muscle cell of the coronary artery
2
tibial nerve
1
Ammon's horn
1
B-1a B cell
1
C1 segment of cervical spinal cord
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
S-shaped body
1
adipocyte
1
adrenal gland
1
amygdala
1
anterior cingulate cortex
1
aorta wall
1
ascending aorta
1
astrocyte
1
bladder
1
brain
1
breast - mammary tissue
1
cardiac atrium fibroblast
1
cardiac fibroblast
1
cardiac muscle cell (pacemaker cell)
1
cardiac ventricle fibroblast
1
caudate nucleus
1
cells - EBV-transformed lymphocytes
1
cells - cultured fibroblasts
1
central memory CD4-positive, alpha-beta T cell
1
cerebellum (Hemisphere)
1
cervix - ectocervix
1
cervix - endocervix
1
colon - sigmoid
1
colon - transverse
1
coronary artery
1
diencephalon
1
dorsolateral prefrontal cortex
1
effector memory CD4-positive, alpha-beta T cell
1
embryonic stem cell
1
endothelial cell of coronary artery
1
epithelial cell of proximal tubule
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
excitatory neuron
1
fallopian tube
1
gastrocnemius medialis(Muscle - Skeletal)
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
heart left ventricle
1
hematopoietic multipotent progenitor cell
1
hippocampal neuron
1
hypothalamus
1
intermediate cardiomyocytes
1
intermediate endothelial cell
1
intermediate smooth muscle cell
1
kidney - cortex
1
kidney - medulla
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney loop of Henle descending limb epithelial cell
1
kidney tubule cell
1
left ventricle myocardium
1
lower motor neuron
1
lung
1
mesangial cell
1
mesenchymal stem cell of adipose
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
metanephros
1
minor salivary gland
1
myeloid dendritic cell
1
naive B cell
1
naive regulatory T cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
nephron progenitor
1
nucleus accumbens
1
occipital lobe
1
ovary
1
pancreatic alpha cell
1
parietal lobe
1
pericardium fibroblast
1
pituitary
1
prostate
1
putamen
1
renal cortical epithelial cell
1
retina
1
right lobe of liver
1
skeletal muscle
1
skeletal muscle myoblast
1
skeletal muscle satellite cell
1
skeletal muscle tissue
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
1
small intestine - terminal Ileum
1
smooth muscle cell
1
spleen
1
stem cell
1
stomach
1
substantia nigra
1
temporal lobe
1
testis
1
thyroid
1
tibial artery
1
uterus
1
vagina
1
whole blood
Organ
1
brain
Life stage
1
adult
Date released
3
May, 2021
1
January, 2020
Software used
4
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
annotation_category!
Genetic variant effects
Showing 4 of 4 results
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Download
FileSet
DSR534CRD
released
Annotation file set
: GSE118165 gene expression annotation of normal B cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR630ZBK
released
Annotation file set
: GSE118165 gene expression annotation of LPS-stimulated B cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR627YNJ
released
Annotation file set
: Gene expression annotation of mesodermal cell_cardiomyocyte intermediate (CI) ISL1+TNNT2+ on day 6 from embryonic stem cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR821ULJ
released
Annotation file set
: Gene expression summary of TPM of brain hippocampus from GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP