Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
Annotation Category
Target gene links
2
cis-regulatory elements
Annotation type Category
ChIP-seq
9
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
39
monocyte
38
islet of Langerhans
31
endothelial cell
26
macrophage
26
retina
24
fibroblast
23
hepatocyte
20
EndoC_BH1
20
pigmented layer of retina
19
kidney
18
epithelial cell of proximal tubule
18
pancreatic ductal cell
18
subcutaneous adipose tissue
17
glomerular endothelial cell
17
neural progenitor cell
16
induced pluripotent stem cell
15
pancreatic beta cell
15
smooth muscle cell
14
excitatory neuron
14
liver
14
pancreatic acinar cell
14
pancreatic alpha cell
14
regulatory T cell
12
coronary artery
12
pancreatic delta cell
12
right atrium auricular region
12
tibial nerve
11
T cell
11
T-helper 1 cell
11
cardiomyocytes
11
tibial artery
10
B cell
10
T-helper 17 cell
10
adipose tissue
10
endothelial cell of hepatic sinusoid
10
frontal cortex
10
heart
10
pericyte cell
10
putamen
9
H1-hESC
9
adipocyte
9
astrocyte
9
caudate nucleus
9
extended pluripotent stem (EPS) cells
9
glomerular visceral epithelial cell
9
omental fat pad
9
pancreatic stellate cell
9
progenitor cell of endocrine pancreas
9
retinal pigment epithelial cell
9
skeletal muscle fiber
8
CD8-positive, alpha-beta T cell
8
cerebellum
7
Ammon's horn
7
ascending aorta
7
body of pancreas
7
embryonic stem cell
7
heart left ventricle
7
kidney interstitial cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
lymphoblastoid cell line
7
memory B cell
7
mesangial cell
7
naive thymus-derived CD8-positive, alpha-beta T cell
7
natural killer cell
7
osteoblast
7
pancreas
7
skeletal muscle satellite cell
7
substantia nigra
6
SGBS preadipocytes
6
T-helper 2 cell
6
amygdala
6
anterior cingulate cortex
6
brain
6
cerebellum (Hemisphere)
6
enterocyte
6
gamma-delta T cell
6
glutamatergic neuron
6
hypothalamus
6
mesenchymal stem cell
6
naive thymus-derived CD4-positive, alpha-beta T cell
6
nucleus accumbens
6
type I muscle cell
6
type II muscle cell
5
cardiac fibroblast
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
C1 segment of cervical spinal cord
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
T follicular helper cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
cardiac precursors (cardiac muscle cell)
5
cardiomyocytes (cardiac muscle cell)
5
central memory CD8-positive, alpha-beta T cell
5
chondrocyte
5
effector memory CD8-positive, alpha-beta T cell
5
erythroblast
5
gastrocnemius medialis(Muscle - Skeletal)
5
hepatic stellate cell
5
inhibitory neuron
5
kidney cortex collecting duct principal cell
5
kidney distal convoluted tubule epithelial cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
left ventricle myocardium
5
pancreatic endothelial cell
5
pancreatic polypeptide-secreting cell
5
right lobe of liver
5
stomach
5
type II pneumocyte
4
CD4-positive helper T cell
4
Pancreatic progenitors (progenitor cell of endocrine pancreas)
4
Schwann cell
4
basal cell
4
bone tissue
4
cardiac muscle cell
4
cartilage tissue
4
cortical cell of adrenal gland
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
effector CD4-positive, alpha-beta T cell
4
effector T cell
4
fibroblast of cardiac tissue
4
kidney connecting tubule epithelial cell
4
kidney glomerular epithelial cell
4
leukocyte
4
mature natural killer cell
4
memory T cell
4
memory regulatory T cell
4
myofibroblast cell
4
naive B cell
4
nephron progenitor
4
neutrophil
4
occipital lobe
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
renal cortical epithelial cell
4
skeletal muscle myoblast
4
smooth muscle cell of the coronary artery
4
spleen
4
vascular associated smooth muscle cell
4
visceral abdominal adipose tissue
3
Cycling Mononuclear Phagocyte
3
Mast Cell
3
S-shaped body
3
adrenal gland
3
adult endothelial progenitor cell
3
blood cell
Organ
1
blood
1
bodily fluid
1
embryo
Date released
2
June, 2020
Software used
2
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
annotation_category!
Target gene links
annotation_type_category!
ChIP-seq
biosample_term_name!
globus pallidus
Showing 2 of 2 results
table-tab-icon
matrix-icon
Download
FileSet
DSR863QPI
released
Annotation file set
: Accessible chromatin annotation for Pluripotent stem cell hESC HUES8 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR191JBF
released
Annotation file set
: Accessible chromatin annotation for Blood K-562 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP