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Schema
Citing CMDGA
Clear Filters
Annotation type
3
gene expression
2
differential activity
1
accessible chromatin
Annotation Category
Target gene links
5
Gene expression levels
1
cis-regulatory elements
Annotation type Category
ChIP-seq
8
DNase-seq
5
single cell RNA-seq
Available data
5
tsv
1
bed bed3+
File set status
6
released
Genome assembly (visualization)
1
hg19
Organism
6
Homo sapiens
Biosample type
5
primary cell
1
cell line
Biosample term
39
monocyte
38
islet of Langerhans
34
endothelial cell
29
macrophage
27
fibroblast
26
retina
24
hepatocyte
20
EndoC_BH1
20
pigmented layer of retina
19
kidney
18
epithelial cell of proximal tubule
18
pancreatic ductal cell
18
subcutaneous adipose tissue
17
glomerular endothelial cell
17
neural progenitor cell
17
smooth muscle cell
16
induced pluripotent stem cell
15
pancreatic beta cell
14
excitatory neuron
14
liver
14
pancreatic acinar cell
14
pancreatic alpha cell
14
regulatory T cell
13
B cell
12
coronary artery
12
pancreatic delta cell
12
pericyte cell
12
right atrium auricular region
12
tibial nerve
11
T cell
11
T-helper 1 cell
11
adipocyte
11
cardiomyocytes
11
tibial artery
10
T-helper 17 cell
10
adipose tissue
10
endothelial cell of hepatic sinusoid
10
frontal cortex
10
heart
10
natural killer cell
10
putamen
9
H1-hESC
9
astrocyte
9
caudate nucleus
9
extended pluripotent stem (EPS) cells
9
glomerular visceral epithelial cell
9
omental fat pad
9
pancreatic stellate cell
9
progenitor cell of endocrine pancreas
9
retinal pigment epithelial cell
9
skeletal muscle fiber
8
CD8-positive, alpha-beta T cell
8
cerebellum
7
Ammon's horn
7
ascending aorta
7
body of pancreas
7
embryonic stem cell
7
heart left ventricle
7
kidney interstitial cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
lymphoblastoid cell line
7
memory B cell
7
mesangial cell
7
naive thymus-derived CD8-positive, alpha-beta T cell
7
osteoblast
7
pancreas
7
skeletal muscle satellite cell
7
substantia nigra
6
SGBS preadipocytes
6
T-helper 2 cell
6
amygdala
6
anterior cingulate cortex
6
brain
6
cerebellum (Hemisphere)
6
endothelial cell of lymphatic vessel
6
enterocyte
6
gamma-delta T cell
6
glutamatergic neuron
6
hepatic stellate cell
6
hypothalamus
6
mast cell
6
mesenchymal stem cell
6
naive thymus-derived CD4-positive, alpha-beta T cell
6
nucleus accumbens
6
type I muscle cell
6
type II muscle cell
5
cardiac fibroblast
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
C1 segment of cervical spinal cord
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
T follicular helper cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
cardiac precursors (cardiac muscle cell)
5
cardiomyocytes (cardiac muscle cell)
5
central memory CD8-positive, alpha-beta T cell
5
chondrocyte
5
effector memory CD8-positive, alpha-beta T cell
5
erythroblast
5
gastrocnemius medialis(Muscle - Skeletal)
5
inhibitory neuron
5
kidney cortex collecting duct principal cell
5
kidney distal convoluted tubule epithelial cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
left ventricle myocardium
5
myofibroblast cell
5
pancreatic endothelial cell
5
pancreatic polypeptide-secreting cell
5
right lobe of liver
5
stomach
5
type II pneumocyte
4
CD4-positive helper T cell
4
Pancreatic progenitors (progenitor cell of endocrine pancreas)
4
Schwann cell
4
basal cell
4
bone tissue
4
cardiac muscle cell
4
cartilage tissue
4
cortical cell of adrenal gland
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
effector CD4-positive, alpha-beta T cell
4
effector T cell
4
endocardial cell
4
fibroblast of cardiac tissue
4
kidney connecting tubule epithelial cell
4
kidney glomerular epithelial cell
4
leukocyte
4
mature natural killer cell
4
memory T cell
4
memory regulatory T cell
4
naive B cell
4
nephron progenitor
4
neutrophil
4
occipital lobe
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
renal cortical epithelial cell
4
skeletal muscle myoblast
4
smooth muscle cell of the coronary artery
4
spleen
4
vascular associated smooth muscle cell
4
visceral abdominal adipose tissue
3
Cycling Mononuclear Phagocyte
3
Mast Cell
3
S-shaped body
Disease term
1
Acute kidney failure, unspecified
1
Chronic kidney disease (CKD)
1
acute kidney failure
1
chronic kidney disease
Organ
1
blood
1
bodily fluid
Life stage
5
adult
Date released
5
September, 2023
1
June, 2020
Software used
3
r
2
deseq2
1
macs
Lab
5
KPMP
1
AMP-T2D consortium
Project
5
KPMP
1
AMP
RFA
5
KPMP
1
AMP
annotation_category!
Target gene links
annotation_type_category!
ChIP-seq
biosample_term_name!
Cytotoxic T Cell
Showing 6 of 6 results
table-tab-icon
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Download
FileSet
DSR543EHM
released
Annotation file set
: Differential activity annotation of Natural Killer T Cell Type 2 between CKD and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR370WQD
released
Annotation file set
: Differential activity annotation of Natural Killer T Cell Type 2 between AKI and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR811OYB
released
Annotation file set
: Gene expression annotation of Natural Killer T Cell Type 2 of healthy individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR895GIO
released
Annotation file set
: Gene expression annotation of Natural Killer T Cell Type 2 of CKD individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR564XRE
released
Annotation file set
: Gene expression annotation of Natural Killer T Cell Type 2 of AKI individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR191JBF
released
Annotation file set
: Accessible chromatin annotation for Blood K-562 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP