Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
accessible chromatin
2
candidate regulatory elements
1
variant allelic effects
Annotation Category
4
cis-regulatory elements
Target gene links
1
Genetic variant effects
Annotation type Category
5
DNase-seq
2
ChIP-seq
Available data
6
tsv
5
bed bed3+
2
bed bed9
1
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
tissue
Biosample term
46
heart
44
kidney
44
stomach
36
brain
35
muscle of arm
33
lung
32
retina
30
placenta
30
small intestine
29
adrenal gland
29
large intestine
29
muscle of leg
28
muscle of back
26
left lung
23
right lung
23
thymus
22
liver
22
renal cortex interstitium
22
renal pelvis
21
right kidney
20
pigmented layer of retina
18
left kidney
18
spleen
17
heart left ventricle
15
islet of Langerhans
15
spinal cord
14
pancreas
12
adipose tissue
11
sigmoid colon
11
tibial nerve
10
testis
10
upper lobe of left lung
9
body of pancreas
9
caudate nucleus
9
coronary artery
9
gastrocnemius medialis
9
layer of hippocampus
9
left cardiac atrium
9
ovary
9
prostate gland
9
thyroid gland
9
transverse colon
8
Peyer's patch
8
chorionic villus
8
heart right ventricle
8
left renal pelvis
8
muscle of trunk
8
psoas muscle
8
right atrium auricular region
8
right renal pelvis
8
tibial artery
7
endocrine pancreas
7
esophagus squamous epithelium
7
left renal cortex interstitium
7
omental fat pad
7
skeletal muscle tissue
7
subcutaneous adipose tissue
7
substantia nigra
7
temporal lobe
6
ascending aorta
6
breast epithelium
6
colonic mucosa
6
esophagus muscularis mucosa
6
lower leg skin
6
right renal cortex interstitium
6
subcutaneous abdominal adipose tissue
6
thoracic aorta
6
trophoblast
5
cerebellum
5
cingulate gyrus
5
duodenal mucosa
5
eye
5
frontal cortex
5
gastroesophageal sphincter
5
globus pallidus
5
midbrain
5
mucosa of rectum
5
occipital lobe
5
parathyroid adenoma
5
putamen
5
stomach smooth muscle
5
tongue
4
Ammon's horn
4
angular gyrus
4
aorta
4
chorion membrane
4
esophagus
4
limb
4
muscle layer of colon
4
muscle layer of duodenum
4
superior temporal gyrus
4
umbilical cord
4
urinary bladder
4
uterus
4
vagina
3
cerebellar cortex
3
cortex of kidney
3
medulla oblongata
3
middle frontal gyrus
3
pons
3
prefrontal cortex
3
suprapubic skin
2
hindlimb muscle
2
muscle of leg
2
Brodmann (1909) area 46
2
amnion
2
breast carcinoma
2
cartilage tissue
2
chorion
2
embryonic facial prominence
2
endometrium cancer
2
femur
2
first pancreatic bud
2
forelimb muscle
2
germinal matrix
2
inferior parietal cortex
2
kidney epithelium
2
mammary gland
2
middle frontal area 46
2
mucosa of stomach
2
pancreatic ductal cell
2
pancreatic stellate cell
2
placental basal plate
2
rectum smooth muscle tissue
2
respiratory system smooth muscle
2
right cardiac atrium
2
right lobe of liver
2
skin of forearm
2
skin of prepuce of penis
2
tissue
1
left kidney
1
omental fat pad
1
Brodmann (1909) area 9
1
Crypt of Lieberkuhn
1
Schwann cell
1
amygdala
1
anterior parahippocampal gyrus
1
arcuate nucleus of hypothalamus
1
arm bone
1
bed nucleus of stria terminalis
1
caput epididymis
1
cardiogenic mesoderm
1
cerebellum (Hemisphere)
1
cerebrospinal fluid
1
circle of Willis
1
claustrum of brain
1
colon
1
corneal epithelium
1
crypt of Lieberkuhn
1
dentate nucleus
1
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
dorsal lateral geniculate nucleus
1
dura mater
1
endometrium
1
endothelial cell
1
entorhinal cortex
1
epididymis
1
fallopian tube
1
fetal heart
1
frontal pole
1
germinal center
1
glomerular epithelium
1
gyrus rectus
1
hindlimb muscle
1
hypothalamus
1
intestinal epithelium
1
left leg bone
1
leg bone
1
locus ceruleus
1
medial dorsal nucleus of thalamus
1
medulloblastoma
1
mid-frontal lobe
1
morula
1
myelencephalon
1
nephron tubule
1
nucleus accumbens
1
nucleus of ventral thalamus
1
pancreatic A cell
1
pancreatic D cell
1
pancreatic PP cell
1
pancreatic acinar cell
1
pancreatic adenocarcinoma
1
pancreatic carcinoma
1
paraventricular nucleus of hypothalamus
1
pineal body
1
piriform cortex
1
pituitary gland
1
pontine tegmentum
1
precentral gyrus
1
precuneus cortex
1
proximal epiphysis
1
proximal epiphysis of femur
1
proximal epiphysis of humerus
1
proximal epiphysis of tibia
1
pulvinar nucleus
1
raphe nuclei
1
rectal smooth muscle tissue
Organ
5
brain
Life stage
3
adult
Date released
2
September, 2022
1
January, 2020
1
June, 2020
1
May, 2020
Software used
2
macs
2
r
1
deltasvm
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
annotation_category!
Target gene links
biosample_term_name!
beige adipocyte
Showing 5 of 5 results
table-tab-icon
matrix-icon
Download
FileSet
DSR637NDW
released
Annotation file set
: Candidate regulatory elements for BSS00371 frontal cortex from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR546RID
released
Annotation file set
: Candidate regulatory elements for BSS00369 frontal cortex from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR744GOP
released
Annotation file set
: Accessible chromatin annotation for Neural Cerebrum frontal OC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR698IHA
released
Annotation file set
: Genetic variants with deltaSVM predictions in brain frontal cortex DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR423PZC
released
Annotation file set
: Accessible chromatin annotation of brain frontal cortex from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP