Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
Annotation Category
2
cis-regulatory elements
Target gene links
Annotation type Category
2
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
cell line
Biosample term
24
A549
22
EndoC_BH1
20
breast cancer cell
14
MCF-7
12
H1-hESC
12
lymphoblastoid cell line
12
neuroblastoma cell
11
HepG2
11
gastric cancer cell
10
K562
10
Rhabdomyosarcoma
9
liposarcoma
8
diffuse intrinsic pontine glioma
8
fibroblast cell line
7
B-lymphoblastoid cell line
7
H9
7
induced pluripotent stem cell
7
melanoma
7
squamous cell lung carcinoma
6
22Rv1
6
HEK293
6
Rh-4 cell
6
SK-N-DZ
6
acute myeloid leukemia
6
glioblastoma multiforme cancer stem cell
6
hESC cell
6
prostate cancer cell line
5
CMK
5
Chondroid Chordoma
5
Ewing sarcoma
5
GM06990
5
GM12864
5
GM12865
5
GM12878
5
GM23248
5
HAP-1
5
HL-60
5
HT-29
5
HeLa-S3
5
IMR-90
5
Jurkat
5
LHCN-M2
5
LNCAP
5
MG63
5
MM.1S
5
NAMALWA cell
5
OCI-LY7
5
PC-3
5
PC-9
5
RPMI8226
5
RS4-11 cell
5
RWPE1
5
SK-N-MC
5
SW480
5
WERI-Rb-1
5
WI38
5
dermal fibroblast
5
esophageal adenocarcinoma
5
esophageal squamous cell carcinoma
5
fibroblast of cardiac tissue
5
melanoma cell
5
osteosarcoma
5
synovial sarcoma cell
5
triple-negative breast cancer
4
AG04449 cell
4
AG04450 cell
4
AG09309 cell
4
AG09319 cell
4
AG10803 cell
4
BE(2)-C
4
BJ cell
4
COLO205
4
Caco-2 cell
4
Daoy
4
GM10248
4
GM10266
4
GM12875
4
GM19240
4
HS-SY-2 cell
4
HUES6
4
HuH-7
4
KARPAS-422 cell
4
KBM-7
4
LoVo cell
4
Mantle cell lymphoma
4
NT2-D1 cell
4
OCI-LY1
4
RKO
4
SJSA1
4
SK-N-SH
4
Tumor-derived cell line
4
cardiac muscle cell
4
glioblastoma cell
4
glioma cell
4
immortal neural cell line cell
4
keratinocyte
4
lung fibroblast cell line
4
metastatic melanoma
4
neural progenitor cell
4
pancreatic cell line
4
smooth muscle cell of the coronary artery
3
786-O cell
3
A-673 cell
3
A172
3
ACHN
3
COLO-320 cell
3
Caki2
3
D341 Med cell
3
G-401 cell
3
GM04503
3
GM04504
3
GM08714
3
GM12873
3
GM12891
3
GM12892
3
GM13976
3
GM13977
3
GM18507
3
GM19238
3
GM19239
3
GM20000
3
H4
3
H7-hESC
3
HAC cell
3
HBMEC cell
3
HCT-116 cell
3
HK-2 cell
3
HUES64
3
HeLa cell
3
Kasumi-1
3
L1-S8
3
LNCaP clone FGC
3
M059J
3
MCF 10A
3
MDA-MB-231 cell
3
MOLM-13 cell
3
Myoblasts
3
NB-4 cell
3
NCCIT cell
3
NHBE cell
3
NHDF cell
3
NHEK
3
Normal Human Astrocytes
3
OCI-AML3
3
OCI-LY3
3
PA-TU-8988T cell
PANC-1 cell
3
RCC 7860
3
REH cell
3
RPMI7951
3
SAEC
3
SJCRH30
3
SK-MEL-5
3
SK-N-SH_RA
3
Saos-2 cell
3
T-47D cell
3
T47D
3
U-266 cell
3
U-87 MG
3
U2OS
3
U937
3
VCaP cell
3
WI-38 cell
3
ZR-75-1 cell
3
cardiac myocyte cell derived cell line
3
choroid plexus epithelial cell
3
colon cancer cell line
3
diffuse large B-cell lymphoma
3
embryonic stem cell
3
endometrium adenocarcinoma
3
epithelial cell of prostate
3
epithelial ovarian cancer cell
3
esophageal epithelial cell
3
hESC H9
3
hematopoietic cell
3
iPSC derived cell line
3
immortal human breast epithelial cell line cell
3
lymphoblast
3
macrophage
3
multiple myeloma cell line
3
prostate derived cell line
3
renal proximal tubule epithelial cell
3
spinal cord
3
umbilical cord mesenchymal stem cell line cell
2
143B
2
501A
2
697 cell
2
769-P cell
2
A-1847 cell
2
A-375 cell
2
A-498 cell
2
A673
2
ACC112
2
AG08396 cell
2
AG10803
2
AGS cell
2
ALL-SIL cell
2
AsPC-1 cell
2
B-lymphocyte
2
BCBL-1 cell
Organ
2
skin of body
Life stage
2
adult
Date released
1
February, 2021
1
September, 2022
Software used
chromhmm
1
encode-ccres
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
annotation_category!
Target gene links
biosample_term_name!
PANC-1 cell
software_used.software.name!
chromhmm
Showing 2 of 2 results
table-tab-icon
matrix-icon
Download
FileSet
DSR047AYQ
released
Annotation file set
: Candidate regulatory elements for BSS00735 iPS-11a from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR859OFU
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE iPS-11a
Lab:
AMP-T2D consortium
Project:
AMP