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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
binding sites
1
histone modifications
Annotation Category
3
cis-regulatory elements
Target gene links
Annotation type Category
2
ChIP-seq
1
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
in vitro differentiated cells
Biosample term
128
monocyte
46
CD8-positive, alpha-beta T cell
44
islet of Langerhans
43
A549
40
common myeloid progenitor, CD34-positive
37
B cell
37
endothelial cell
37
neural progenitor cell
33
hematopoietic multipotent progenitor cell
33
liver
31
hepatocyte
31
macrophage
30
fibroblast
29
kidney
28
retina
25
stomach
24
regulatory T cell
23
CD4-positive, alpha-beta memory T cell
23
adipocyte
23
adipose tissue
22
EndoC_BH1
22
epithelial cell of proximal tubule
22
pancreatic ductal cell
22
spleen
22
tibial nerve
21
adrenal gland
21
heart left ventricle
21
subcutaneous adipose tissue
20
breast cancer cell
20
glomerular endothelial cell
20
natural killer cell
20
pigmented layer of retina
19
MCF-7
19
T-helper 1 cell
19
body of pancreas
19
caudate nucleus
18
K562
18
T cell
18
T-helper 17 cell
18
foreskin keratinocyte
17
coronary artery
17
embryonic stem cell
17
right atrium auricular region
16
endothelial cell of hepatic sinusoid
16
foreskin fibroblast
16
heart
16
keratinocyte
16
pancreas
16
sigmoid colon
16
smooth muscle cell
16
substantia nigra
16
tibial artery
15
CD8-positive, alpha-beta memory T cell
15
endothelial cell of umbilical vein
15
induced pluripotent stem cell
15
omental fat pad
15
osteoblast
15
pancreatic beta cell
15
retinal pigment epithelial cell
14
frontal cortex
14
pancreatic acinar cell
14
pericyte cell
14
skeletal muscle myoblast
13
HepG2
13
T-helper 2 cell
13
cerebellum
13
excitatory neuron
13
gastrocnemius medialis
13
mononuclear cell
13
pancreatic alpha cell
13
putamen
13
skeletal muscle tissue
13
thyroid gland
13
upper lobe of left lung
12
CD14-positive monocyte
12
CD4-positive, alpha-beta T cell
12
ascending aorta
12
layer of hippocampus
12
lymphoblastoid cell line
12
neuroblastoma cell
12
psoas muscle
12
temporal lobe
12
transverse colon
11
H1-hESC
11
astrocyte
11
brain
11
bronchial epithelial cell
11
fibroblast of lung
11
mammary epithelial cell
11
mammary gland epithelial cell
11
mesenchymal stem cell
11
naive thymus-derived CD4-positive, alpha-beta T cell
11
neutrophil
11
ovary
11
prostate gland
11
skeletal muscle satellite cell
10
Ammon's horn
10
Rhabdomyosarcoma
10
gastric cancer cell
10
glomerular visceral epithelial cell
10
hepatic stellate cell
10
pancreatic delta cell
10
progenitor cell of endocrine pancreas
Peyer's patch
9
cardiomyocytes
9
choroid plexus epithelial cell
9
diffuse intrinsic pontine glioma
9
endocrine pancreas
9
esophagus muscularis mucosa
9
fibroblast of cardiac tissue
9
heart right ventricle
9
liposarcoma
9
small intestine
9
testis
8
22Rv1
8
GM12878
8
HeLa-S3
8
SK-N-DZ
8
cardiac muscle cell
8
esophagus squamous epithelium
8
fibroblast of dermis
8
kidney tubule cell
8
lung
8
mast cell
8
neuronal stem cell
8
pancreatic stellate cell
8
skeletal muscle fiber
7
B-lymphoblastoid cell line
7
GM06990
7
GM12865
7
amygdala
7
aorta
7
breast epithelium
7
colonic mucosa
7
epithelial cell of prostate
7
erythroblast
7
esophageal adenocarcinoma
7
extended pluripotent stem (EPS) cells
7
fibroblast cell line
7
mature neutrophil
7
right lobe of liver
7
thoracic aorta
6
AG09309 cell
6
AG09319 cell
6
AG10803 cell
6
BE(2)-C
6
BJ cell
6
CD1c-positive myeloid dendritic cell
6
CMK
6
Caco-2 cell
6
Chondroid Chordoma
6
GM12864
6
HT-29
6
SW480
6
angular gyrus
6
anterior cingulate cortex
6
chondrocyte
6
cingulate gyrus
6
dermis blood vessel endothelial cell
6
duodenal mucosa
6
esophagus
6
fibroblast of villous mesenchyme
6
foreskin melanocyte
6
globus pallidus
6
hESC cell
6
hypothalamus
6
lower leg skin
6
midbrain
6
neuroblastoma cell line
6
nucleus accumbens
6
thymus
5
cardiac fibroblast
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
C1 segment of cervical spinal cord
5
CD14-positive, CD16-negative classical monocyte
5
CD4-positive helper T cell
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Daoy
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
Life stage
embryonic
Date released
2
February, 2021
1
June, 2020
Software used
3
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
annotation_category!
Target gene links
biosample_term_name!
Peyer's patch
relevant_life_stage!
embryonic
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR042QDJ
released
Annotation file set
: Histone modifications annotation for Pluripotent stem cell hESC_derived_mesendodermal_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR827VVM
released
Annotation file set
: Binding sites annotation for Pluripotent stem cell hESC_derived_mesendodermal_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR746BZC
released
Annotation file set
: Accessible chromatin annotation for Pluripotent stem cell hESC derived mesendodermal cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP