Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
gene expression
2
target gene predictions
variant allelic effects
Annotation Category
cis-regulatory elements
2
Gene expression levels
2
Target gene links
Annotation type Category
2
ChIP-seq
2
DNase-seq
1
RNA-seq
1
scRNA-seq
Available data
2
bed bed3+
1
tsv
File set status
4
released
Genome assembly (visualization)
2
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
1
in vitro differentiated cells
Biosample term
25
monocyte
19
CD14-positive monocyte
19
endothelial cell
17
epithelial cell of proximal tubule
16
hepatocyte
15
glomerular endothelial cell
14
common myeloid progenitor, CD34-positive
13
macrophage
13
regulatory T cell
12
B cell
11
T-helper 1 cell
11
T-helper 17 cell
10
pancreatic delta cell
10
pericyte cell
9
CD4-positive, alpha-beta memory T cell
9
naive thymus-derived CD4-positive, alpha-beta T cell
9
neutrophil
9
pancreatic acinar cell
9
pancreatic alpha cell
9
pancreatic beta cell
9
pancreatic ductal cell
9
smooth muscle cell
8
CD8-positive, alpha-beta T cell
8
natural killer cell
7
CD8-positive, alpha-beta memory T cell
7
T-helper 2 cell
7
kidney loop of Henle thin ascending limb epithelial cell
6
T cell
6
fibroblast
6
glomerular visceral epithelial cell
6
kidney interstitial cell
6
mononuclear cell
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
olfactory receptor cell
6
pancreatic stellate cell
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
astrocyte
5
keratinocyte
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
memory B cell
5
mesangial cell
5
trophoblast cell
4
CD4-positive helper T cell
4
adult endothelial progenitor cell
4
endothelial cell of hepatic sinusoid
4
endothelial cell of umbilical vein
4
fibroblast of cardiac tissue
4
fibroblast of dermis
4
fibroblast of lung
4
foreskin keratinocyte
4
gamma-delta T cell
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
mammary gland epithelial cell
4
nephron progenitor
4
osteoblast
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic endothelial cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
skeletal muscle satellite cell
4
type I muscle cell
4
type II muscle cell
3
CD4-positive, alpha-beta T cell
3
Cycling Mononuclear Phagocyte
3
Mast Cell
3
S-shaped body
3
T follicular helper cell
3
activated CD4-positive, alpha-beta T cell
3
blood cell
3
central memory CD8-positive, alpha-beta T cell
3
colon epithelial cell
3
effector memory CD8-positive, alpha-beta T cell
3
epithelial cell of prostate
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
kidney tubule cell
3
luminal epithelial cell of mammary gland
3
mesenchymal stem cell
3
naive B cel
3
naive B cell
3
naive T cell
3
neurosphere
3
pancreatic A cell
3
pancreatic polypeptide-secreting cell
3
pancreatic quiescent stellate cell
3
skeletal muscle myoblast
3
skin fibroblast
3
smooth muscle cell of the coronary artery
3
type B pancreatic cell
2
Kupffer cell
2
T-cell
2
activated CD8-positive, alpha-beta T cell
2
alternatively activated macrophage
2
articular chondrocyte
2
blood vessel smooth muscle cell
2
bronchial epithelial cell
2
cortical cell of adrenal gland
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
enteric smooth muscle cell
2
erythroblast
2
fat cell
2
fibroblast of breast
2
fibroblast of the aortic adventitia
2
foreskin fibroblast
2
gabaergic neuron
2
glutamatergic neuron
2
hepatic stellate cell
2
inflammatory macrophage
2
kidney epithelial cell
2
kidney glomerular epithelial cell
2
kidney inner medulla collecting duct intercalated cell
2
leukocyte
2
mast cell
2
mature natural killer cell
2
megakaryocyte
2
memory T cell
2
memory regulatory T cell
2
microglial cell
2
myoepithelial cell of mammary gland
2
plasma cell
2
renal cortical epithelial cell
2
renal vesicle
2
skeletal muscle fiber
2
smooth muscle cell of the esophagus
2
type II pneumocyte
2
vascular associated smooth muscle cell
1
B cell, CD19-positive
1
B-1 B cell
1
B-1a B cell
1
B-2 B cell
1
CD1c-positive myeloid dendritic cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
CD56-positive, CD161-positive immature natural killer cell
1
Leydig cell
Organ
1
epithelium
Life stage
3
adult
1
unknown
Date released
2
September, 2022
1
February, 2020
1
February, 2021
Software used
4
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
annotation_category!
cis-regulatory elements
annotation_type!
variant allelic effects
Showing 4 of 4 results
table-tab-icon
matrix-icon
Download
FileSet
DSR399BTJ
released
Annotation file set
: Target gene predictions for BSS01574 skeletal muscle myoblast from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR169FWP
released
Annotation file set
: Target gene predictions for BSS01573 skeletal muscle myoblast from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR823PUX
released
Annotation file set
: Gene expression levels (pseudobulks UMI) of liver Cholangiocyte from GSE115469 scRNA-seq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR846HCI
released
Annotation file set
: Gene expression levels of Skeletal muscle myoblast cell from RNA-seq (ENCODE)
Lab:
AMP-T2D consortium
Project:
AMP