Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
4
target gene predictions
2
gene expression
1
variant allelic effects
Annotation Category
cis-regulatory elements
4
Target gene links
2
Gene expression levels
1
Genetic variant effects
Annotation type Category
6
DNase-seq
4
ATAC-seq
4
H3K27ac ChIP-Seq
ChIP-seq
1
RNA-seq
1
snATAC-seq
1
snRNA-seq
Available data
5
bed bed3+
1
tsv
File set status
7
released
Genome assembly (visualization)
6
hg19
Organism
7
Homo sapiens
Biosample type
5
in vitro differentiated cells
2
primary cell
Biosample term
16
subcutaneous adipose tissue
12
fibroblast
10
adipose tissue
9
pericyte cell
7
adipocyte
7
omental fat pad
6
pancreatic stellate cell
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Fibroblast
5
Mesangial Cell
5
mesangial cell
5
mesenchymal stem cell
4
adult endothelial progenitor cell
4
bone tissue
4
cartilage tissue
4
visceral abdominal adipose tissue
3
osteoblast
3
pancreatic quiescent stellate cell
2
cardiac fibroblast
2
articular chondrocyte
2
fat cell
2
hepatic stellate cell
1
omental fat pad
1
Adipose SGBS cell line (adipocyte)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
Preadipose SGBS cell line (adipocyte)
1
activated pancreatic stellate cell
1
beige adipocyte
1
brain pericyte
1
cardiac atrium fibroblast
1
cardiac fibroblast
1
cardiac ventricle fibroblast
1
fibroblast of arm
1
fibroblast of cardiac tissue
1
fibroblast of dermis
1
fibroblast of lung
1
fibroblast of the aortic adventitia
1
foreskin fibroblast
1
kidney interstitial fibroblast
1
luteal cell
1
mesenchymal stem cell of adipose
1
pericardium fibroblast
1
quiescent pancreatic stellate cell
1
skin fibroblast
1
stromal cell
1
white adipose cell
1
white adipose tissue
Organ
7
connective tissue
Life stage
1
adult
Date released
4
May, 2021
2
February, 2024
1
February, 2021
Software used
4
abc
2
r
1
deeptools
1
deltasvm
1
samtools
1
umitools
Lab
4
Jesse Engreitz, Stanford University
1
AMP-T2D consortium
1
Bing Ren, UCSD
1
Stephen Parker, UMich
Project
7
AMP
RFA
6
AMP
1
AMP2
annotation_category!
cis-regulatory elements
annotation_type_category!
ChIP-seq
biosample_term_name!
mature neutrophil
Showing 7 of 7 results
table-tab-icon
matrix-icon
Download
FileSet
DSR356IFR
released
Annotation file set
: Gene expression annotation of adipocyte from abdominal and gluteo-femoral preadipocytes of GSE118500 for GSE118497
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR143RUO
released
Annotation file set
: Cell type gene expression mean TPM and bw of adipocyte from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR039HOA
released
Annotation file set
: enhancer-gene predicton of Adipocyte-Claussnitzer_d14 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR164LWB
released
Annotation file set
: enhancer-gene predicton of Adipocyte-Claussnitzer_d6 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR542JXE
released
Annotation file set
: enhancer-gene predicton of Adipocyte-Claussnitzer_d2 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR941KCA
released
Annotation file set
: enhancer-gene predicton of Adipocyte-Claussnitzer_d0 from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR476AJZ
released
Annotation file set
: Variant allelic effects annotation of Adipocyte from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP