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Citing CMDGA
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Annotation type
1
target gene predictions
Annotation Category
cis-regulatory elements
1
Target gene links
Annotation type Category
16
HiC
7
DNase-seq
6
ChIP-seq
5
single cell RNA-seq
3
RNA-seq
2
ATAC-seq
1
H3K27ac ChIP-Seq
1
snATAC-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
6
fibroblast
5
endothelial cell
5
macrophage
4
pancreatic alpha cell
4
pancreatic beta cell
4
pancreatic delta cell
3
enterocyte
3
myofibroblast cell
3
smooth muscle cell
2
Schwann cell
2
T cell
2
basal cell
2
epithelial cell of esophagus
2
goblet cell
2
pancreatic acinar cell
2
pancreatic ductal cell
2
pancreatic polypeptide-secreting cell
2
skeletal muscle fiber
2
vascular associated smooth muscle cell
1
CD8-positive, alpha-beta T cell
1
Satellite Cells, Skeletal Muscle
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
adipocyte
1
bronchial goblet cell
1
cardiac muscle cell
1
cell
1
conventional dendritic cell
1
cortical cell of adrenal gland
1
fibroblast of the aortic adventitia
1
granulosa cell
1
hepatocyte
1
keratinocyte
1
luminal epithelial cell of prostatic duct
1
lymphocyte of B lineage
1
mammary gland epithelial cell
1
mast cell
1
megakaryocyte
1
memory B cell
1
mesenchymal stem cell
1
mesothelial cell
1
monocyte
1
naive B cell
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell
1
natural killer cell mediated cytotoxicity
1
non-classical monocyte
1
pancreatic endocrine cell
1
pancreatic stellate cell
1
parietal cell
1
peptic cell
1
plasmacytoid dendritic cell
1
regulatory T cell
1
smooth muscle cell of the coronary artery
1
stellate neuron
1
thyroid follicular cell
1
type I muscle cell
1
type II muscle cell
1
type II pneumocyte
Date released
1
January, 2021
Software used
1
cicero
Lab
1
Kyle Gaulton, UCSD
Project
1
T1D
RFA
1
T1D
annotation_category!
cis-regulatory elements
Showing 1 of 1 results
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Download
FileSet
DSR212PJX
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of memory_B
Lab:
Kyle Gaulton, UCSD
Project:
T1D