Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
eQTL
1
variant allelic effects
Annotation Category
cis-regulatory elements
3
Genetic variant effects
Annotation type Category
2
RNA-seq
1
DNase-seq
Available data
2
bed bed3+
File set status
3
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
2
tissue
1
primary cell
Biosample term
52
HeLa-S3
38
H1-hESC
19
HFFc6
19
islet of Langerhans
17
K562
15
CD14-positive monocyte
13
macrophage
11
liver
11
subcutaneous adipose tissue
10
monocyte
10
pituitary stalk
9
coronary artery
8
fibroblast
8
hepatocyte
7
GM12878
7
H9
7
adipose tissue
7
naive thymus-derived CD4-positive, alpha-beta T cell
7
neutrophil
7
putamen
7
right atrium auricular region
7
tibial artery
7
tibial nerve
6
body of pancreas
6
caudate nucleus
6
dendritic cell
6
frontal cortex
6
iPSC derived cell line
6
lymphoblastoid cell line
6
lymphocyte
6
olfactory receptor cell
6
substantia nigra
5
Ammon's horn
5
adipocyte
5
amygdala
5
anterior cingulate cortex
5
ascending aorta
5
cerebellum
5
cerebellum (Hemisphere)
5
endothelial cell
5
heart left ventricle
5
hypothalamus
5
nucleus accumbens
5
omental fat pad
5
pancreas
4
C1 segment of cervical spinal cord
4
CyT49
4
HUES8
4
T cell
4
adrenal gland
4
cardiomyocytes (cardiac muscle cell)
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
endothelial cell of hepatic sinusoid
4
gastrocnemius medialis(Muscle - Skeletal)
4
left ventricle myocardium
4
mesenchymal stem cell
4
psoas muscle
4
right lobe of liver
4
smooth muscle cell
3
CD8-positive, alpha-beta T cell
3
EndoC_BH1
3
blood cell
3
brain
3
cardiac muscle cell
3
endothelial cell of umbilical vein
3
enterocyte
3
heart
3
heart right ventricle
3
myofibroblast cell
3
ovary
3
skin of body
3
small intestine
3
spleen
3
stomach
3
thymus
2
cardiac fibroblast
2
muscle of leg
2
B cell
2
BJAB cell
2
CD4-positive helper T cell
2
CD4-positive, alpha-beta T cell
2
HCT116
2
HepG2
2
Jurkat
2
MCF 10A cell
2
MIN6
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
Schwann cell
2
T-cell
2
THP-1
2
U937
2
activated CD4-positive, alpha-beta T cell
2
aorta
2
basal cell
2
blood
2
cardiac precursors (cardiac muscle cell)
2
dorsolateral prefrontal cortex
2
epithelial cell of esophagus
2
erythroblast
2
esophagus
2
goblet cell
2
keratinocyte
2
kidney
2
lung
2
lymphocyte of B lineage (iPSC)
2
mesendoderm
2
muscle
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
natural killer cell
2
pancreatic acinar cell
2
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic delta cell
2
pancreatic ductal cell
2
placenta
2
regulatory T cell
2
retina
2
sigmoid colon
2
skeletal muscle fiber
2
skeletal muscle myoblast
2
skeletal muscle tissue
2
smooth muscle cell of the coronary artery
2
spinal cord
2
thyroid gland
2
tissue
2
transverse colon
2
trophoblast cell
2
type I muscle cell
2
type II muscle cell
2
uterus
2
vascular associated smooth muscle cell
2
visceral abdominal adipose tissue
1
brain microvascular endothelial cell
1
hindlimb muscle
1
left kidney
1
omental fat pad
1
retinal pigment epithelial cell
1
A549
1
A673
1
Adipose SGBS cell line (adipocyte)
1
B cell, CD19-positive
1
B-lymphoblastoid cell line
1
CD56-positive, CD161-positive immature natural killer cell
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
GM18486
1
GM18505
1
GM18507
1
GM18508
1
GM18516
1
GM18522
1
GM19099
1
GM19141
1
GM19193
1
GM19204
1
GM19238
1
GM19239
1
GM19240
1
H7-hESC
1
HAP-1
1
HCT-116 cell
1
HT-29
1
Heart fetal (cardiac muscle cell)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
IMR-90
1
KARPAS-422 cell
1
LNCAP
1
Leydig cell
1
Liver fetal (hepatocyte)
1
LoVo cell
1
MCF-7
1
MDA-MB-231 cell
1
MM.1S
1
NCCIT cell
1
OCI-LY7
1
PC-9
1
Panc1
1
Pancreatic islets
1
Preadipose SGBS cell line (adipocyte)
1
SK-N-SH
1
Satellite Cells, Skeletal Muscle
1
T follicular helper cell
1
T-helper 1 cell
1
T-helper 17 cell
1
T-helper 2 cell
1
abdominal aorta artery
1
activated CD8-positive, alpha-beta T cell
1
adult endothelial progenitor cell
1
alternatively activated macrophage
1
aorta wall
1
astrocyte
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
beige adipocyte
1
bipolar neuron
1
bladder (urinary bladder)
1
brain pericyte
1
breast
1
breast epithelium
Organ
2
kidney
Life stage
1
fetal
Date released
1
August, 2021
1
January, 2022
1
May, 2020
Software used
r
1
deltasvm
1
matrix-eQTL
1
qTLtools
1
seurat
Lab
2
AMP-T2D consortium
1
Katalin Susztak, Upenn
Project
3
AMP
RFA
2
AMP
1
AMP2
annotation_category!
cis-regulatory elements
software_used.software.name!
r
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR742CPO
released
Annotation file set
: Th17 memory eQTL of studay Schmiedel_2018 from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR049INR
released
Annotation file set
: eQTL of kidney from Katalin Susztak Lab based on 121 kidney samples
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR821RRV
released
Annotation file set
: Genetic variants with deltaSVM predictions in kidney fetal DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP