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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
target gene predictions
Annotation Category
cis-regulatory elements
2
Target gene links
Annotation type Category
2
DNase-seq
1
ATAC-seq
1
ChIP-seq
1
H3K27ac ChIP-Seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
55
HeLa-S3
39
H1-hESC
32
islet of Langerhans
25
heart
25
monocyte
23
K562
23
kidney
23
stomach
20
brain
20
liver
19
A549
19
HFFc6
19
adrenal gland
19
lung
18
CD14-positive monocyte
18
small intestine
17
epithelial cell of proximal tubule
17
hepatocyte
17
muscle of arm
16
placenta
16
subcutaneous adipose tissue
15
adipose tissue
15
endothelial cell
15
glomerular endothelial cell
15
macrophage
14
large intestine
14
muscle of leg
14
thymus
13
left lung
13
muscle of back
12
body of pancreas
12
coronary artery
12
neural progenitor cell
12
tibial nerve
11
EndoC_BH1
11
cardiomyocytes
11
common myeloid progenitor, CD34-positive
11
heart left ventricle
11
regulatory T cell
11
right atrium auricular region
11
right kidney
11
right lung
10
B cell
10
T-helper 1 cell
10
caudate nucleus
10
frontal cortex
10
hematopoietic multipotent progenitor cell
10
induced pluripotent stem cell
10
pituitary stalk
10
renal cortex interstitium
10
renal pelvis
10
spleen
10
tibial artery
9
cerebellum
9
left kidney
9
omental fat pad
9
putamen
9
spinal cord
9
substantia nigra
8
GM12878
8
H9
8
T-helper 17 cell
8
adipocyte
8
ascending aorta
8
fibroblast
8
naive thymus-derived CD4-positive, alpha-beta T cell
8
ovary
8
pancreatic acinar cell
8
pancreatic alpha cell
8
pancreatic beta cell
8
pancreatic delta cell
8
pancreatic ductal cell
8
psoas muscle
7
Ammon's horn
7
T cell
7
cardiomyocytes (cardiac muscle cell)
7
dendritic cell
7
glomerular visceral epithelial cell
7
heart right ventricle
7
kidney loop of Henle thin ascending limb epithelial cell
7
lymphocyte
7
mesenchymal stem cell
7
natural killer cell
7
neutrophil
7
pancreas
7
sigmoid colon
7
smooth muscle cell
7
trophoblast cell
6
CD8-positive, alpha-beta T cell
6
MCF-7
6
T-helper 2 cell
6
amygdala
6
anterior cingulate cortex
6
cerebellum (Hemisphere)
6
hypothalamus
6
iPSC derived cell line
6
kidney interstitial cell
6
lymphoblastoid cell line
6
nucleus accumbens
6
olfactory receptor cell
6
retina
6
right lobe of liver
6
thyroid gland
6
transverse colon
5
C1 segment of cervical spinal cord
5
CD8-positive, alpha-beta memory T cell
5
aorta
5
cardiac precursors (cardiac muscle cell)
5
endothelial cell of umbilical vein
5
gastrocnemius medialis
5
gastrocnemius medialis(Muscle - Skeletal)
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
left ventricle myocardium
5
mesangial cell
5
mononuclear cell
5
muscle of trunk
5
naive thymus-derived CD8-positive, alpha-beta T cell
5
pancreatic stellate cell
5
testis
4
CyT49
4
HUES8
4
adult endothelial progenitor cell
4
bone tissue
4
cardiac muscle cell
4
chorionic villus
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
endothelial cell of hepatic sinusoid
4
esophagus
4
foreskin keratinocyte
4
gamma-delta T cell
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
layer of hippocampus
4
nephron progenitor
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic endothelial cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
skeletal muscle fiber
4
skeletal muscle tissue
4
skin of body
4
smooth muscle cell of the coronary artery
4
uterus
4
vagina
4
vascular associated smooth muscle cell
4
visceral abdominal adipose tissue
3
CD4-positive, alpha-beta memory T cell
3
HCT116
3
HepG2
3
Peyer's patch
3
S-shaped body
3
SK-N-SH
3
Schwann cell
3
T follicular helper cell
3
blood cell
3
breast epithelium
3
central memory CD8-positive, alpha-beta T cell
3
dorsolateral prefrontal cortex
3
effector memory CD8-positive, alpha-beta T cell
3
endocrine pancreas
3
endometrium adenocarcinoma
3
enterocyte
3
esophagus muscularis mucosa
3
foreskin fibroblast
3
hepatic stellate cell
3
immortal human breast epithelial cell line cell
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney glomerular epithelial cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
kidney tubule cell
3
left cardiac atrium
3
left renal cortex interstitium
3
left renal pelvis
3
mammary gland epithelial cell
3
memory B cell
3
mesendoderm
3
myofibroblast cell
3
naive B cel
3
neurosphere
3
occipital lobe
3
pancreatic polypeptide-secreting cell
3
pancreatic quiescent stellate cell
3
prostate gland
3
right cardiac atrium
3
right renal cortex interstitium
3
right renal pelvis
3
skeletal muscle myoblast
3
skeletal muscle satellite cell
3
temporal lobe
3
thoracic aorta
3
trophoblast
3
type I muscle cell
Organ
2
connective tissue
2
skin of body
Life stage
unknown
1
adult
Date released
1
May, 2021
1
September, 2022
Software used
1
abc
1
r
Lab
1
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
2
AMP
RFA
2
AMP
annotation_category!
cis-regulatory elements
relevant_life_stage!
unknown
Showing 2 of 2 results
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Download
FileSet
DSR226OCD
released
Annotation file set
: Target gene predictions for BSS00335 fibroblast of dermis from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR627NNY
released
Annotation file set
: enhancer-gene predicton of fibroblast_of_dermis-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP