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Citing CMDGA
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Annotation type
7
gene expression
1
eQTL
Annotation Category
7
Gene expression levels
cis-regulatory elements
1
Genetic variant effects
Annotation type Category
8
RNA-seq
Available data
7
tsv
1
bed bed3+
File set status
8
released
Genome assembly (visualization)
1
hg19
Organism
8
Homo sapiens
Biosample type
8
tissue
Biosample term
15
CD14-positive monocyte
10
pituitary stalk
8
endothelial cell
8
kidney
7
dendritic cell
7
hepatocyte
6
adipocyte
6
fibroblast
6
pancreatic acinar cell
6
pancreatic alpha cell
6
pancreatic beta cell
6
pancreatic delta cell
6
pancreatic ductal cell
5
macrophage
5
smooth muscle cell
4
endothelial cell of hepatic sinusoid
4
mesenchymal stem cell
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic endothelial cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
pancreatic stellate cell
4
skeletal muscle fiber
3
CD8-positive, alpha-beta T cell
3
enterocyte
3
myofibroblast cell
3
pancreatic quiescent stellate cell
3
type I muscle cell
3
type II muscle cell
2
BJAB cell
2
CD4-positive helper T cell
2
Jurkat
2
MCF 10A cell
2
Schwann cell
2
T cell
2
T-cell
2
THP-1
2
U937
2
adrenal gland
2
basal cell
2
cardiac muscle cell
2
epithelial cell of esophagus
2
goblet cell
2
keratinocyte
2
liver
2
natural killer cell
2
stomach
2
subcutaneous adipose tissue
2
trophoblast cell
2
vascular associated smooth muscle cell
1
A549
1
A673
1
B cell
1
B cell, CD19-positive
1
B-1 B cell
1
B-2 B cell
1
CD56-positive, CD161-positive immature natural killer cell
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
GM12878
1
H1-hESC
1
H7-hESC
1
H9
1
HAP-1
1
HCT-116 cell
1
HT-29
1
HeLa-S3
1
HepG2
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
IMR-90
1
K562
1
KARPAS-422 cell
1
LNCAP
1
LoVo cell
1
MCF-7
1
MDA-MB-231 cell
1
MM.1S
1
NCCIT cell
1
OCI-LY7
1
PC-9
1
Panc1
1
Pancreatic islets
1
SK-N-SH
1
Satellite Cells, Skeletal Muscle
1
T-helper 17 cell
1
adipose tissue
1
alternatively activated macrophage
1
astrocyte
1
beige adipocyte
1
bipolar neuron
1
body of pancreas
1
breast epithelium
1
bronchial goblet cell
1
cardiac ventricle
1
cell
1
common myeloid progenitor, CD34-positive
1
coronary artery
1
cortical cell of adrenal gland
1
effector CD8-positive, alpha-beta T cell
1
endothelial cell of umbilical vein
1
epithelial cell of prostate
1
epithelial cell of proximal tubule
1
erythroblast
1
fibroblast of arm
1
fibroblast of dermis
1
fibroblast of lung
1
foreskin fibroblast
1
gastrocnemius medialis
1
glial cell
1
glomerular endothelial cell
1
granulosa cell
1
iPS DF 19.11
1
induced pluripotent stem cell
1
inflammatory macrophage
1
kidney connecting tubule epithelial cell
1
kidney distal convoluted tubule epithelial cell
1
kidney granular cell
1
kidney inner medulla collecting duct epithelial cell
1
kidney interstitial fibroblast
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
large intestine
1
leukocyte
1
luminal epithelial cell of prostatic duct
1
lymphocyte of B lineage
1
mammary epithelial cell
1
mammary gland epithelial cell
1
mast cell
1
megakaryocyte-erythroid progenitor cell
1
mesendoderm
1
mesothelial cell
1
monocyte
1
muscle of leg
1
muscle of trunk
1
myotube
1
neural cell
1
neuronal stem cell
1
osteoblast
1
ovary
1
pancreas
1
pancreatic A cell
1
pancreatic endocrine cell
1
pancreatic polypeptide-secreting cell
1
parietal cell
1
peptic cell
1
placenta
1
psoas muscle
1
renal alpha-intercalated cell
1
renal beta-intercalated cell
1
renal principal cell
1
sigmoid colon
1
skeletal muscle myoblast
1
skeletal muscle satellite cell
1
small intestine
1
smooth muscle cell of the coronary artery
1
spinal cord
1
spleen
1
thymus
1
thyroid follicular cell
1
thyroid gland
1
transverse colon
1
type B pancreatic cell
1
type II pneumocyte
1
undifferentiated ESC (H9 cell line)
1
uterus
1
white adipose tissue
Disease term
1
chronic kidney disease
1
chronic kidney disease, hypertensive disorder
1
diabetes mellitus, hypertensive disorder
1
diabetic kidney disease, hypertensive disorder
1
hypertensive disorder
Organ
8
kidney
Date released
7
February, 2021
1
August, 2021
Software used
7
r
1
matrix-eQTL
Lab
AMP-T2D consortium
8
Katalin Susztak, Upenn
Project
8
AMP
RFA
8
AMP2
annotation_category!
cis-regulatory elements
biosample_term_name!
endometrium adenocarcinoma
lab.title!
AMP-T2D consortium
Showing 8 of 8 results
table-tab-icon
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Download
FileSet
DSR049INR
released
Annotation file set
: eQTL of kidney from Katalin Susztak Lab based on 121 kidney samples
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR383IER
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR992NTS
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq for hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR576EDR
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq for diabetes mellitus/Hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR860SBJ
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq for diabetic kidney disease/Hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR103OWX
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq for control group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR464URP
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq for chronic kidney disease/hypertension group
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR514WID
released
Annotation file set
: Gene expression levels of kidney from Katalin Susztak 75kidney Project RNA-seq for chronic kidney disease group
Lab:
Katalin Susztak, Upenn
Project:
AMP