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Schema
Citing CMDGA
Clear Filters
Annotation type
2
target gene predictions
1
variant allelic effects
Annotation Category
cis-regulatory elements
2
Target gene links
1
Genetic variant effects
Annotation type Category
3
DNase-seq
2
ChIP-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
24
monocyte
19
CD14-positive monocyte
17
epithelial cell of proximal tubule
15
glomerular endothelial cell
14
common myeloid progenitor, CD34-positive
13
macrophage
12
B cell
12
hepatocyte
12
regulatory T cell
11
T-helper 1 cell
10
T-helper 17 cell
9
CD4-positive, alpha-beta memory T cell
9
neutrophil
8
T cell
8
endothelial cell
8
fibroblast
8
naive thymus-derived CD4-positive, alpha-beta T cell
8
pancreatic acinar cell
8
pancreatic alpha cell
8
pancreatic beta cell
8
pancreatic delta cell
8
pancreatic ductal cell
7
CD8-positive, alpha-beta memory T cell
7
T-helper 2 cell
7
kidney loop of Henle thin ascending limb epithelial cell
6
glomerular visceral epithelial cell
6
kidney interstitial cell
6
mononuclear cell
6
natural killer cell
6
olfactory receptor cell
5
CD8-positive, alpha-beta T cell
5
endothelial cell of umbilical vein
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
mesangial cell
5
naive thymus-derived CD8-positive, alpha-beta T cell
5
pancreatic stellate cell
5
trophoblast cell
4
adult endothelial progenitor cell
4
fibroblast of dermis
4
fibroblast of lung
4
foreskin keratinocyte
4
gamma-delta T cell
4
keratinocyte
4
mammary gland epithelial cell
4
nephron progenitor
4
osteoblast
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic endothelial cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
skeletal muscle myoblast
4
vascular associated smooth muscle cell
3
S-shaped body
3
Schwann cell
3
T follicular helper cell
3
astrocyte
3
blood cell
3
cardiac muscle cell
3
central memory CD8-positive, alpha-beta T cell
3
effector memory CD8-positive, alpha-beta T cell
3
enterocyte
3
epithelial cell of esophagus
3
epithelial cell of prostate
3
fibroblast of cardiac tissue
3
hepatic stellate cell
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney connecting tubule epithelial cell
3
kidney cortex collecting duct intercalated cell
3
kidney distal convoluted tubule epithelial cell
3
kidney epithelial cell
3
kidney glomerular epithelial cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
kidney tubule cell
3
memory B cell
3
myofibroblast cell
3
naive B cel
3
naive T cell
3
neurosphere
3
pancreatic polypeptide-secreting cell
3
pancreatic quiescent stellate cell
3
renal cortical epithelial cell
3
smooth muscle cell of the coronary artery
2
cardiac fibroblast
2
CD4-positive helper T cell
2
CD4-positive, alpha-beta T cell
2
Kupffer cell
2
T-cell
2
activated CD4-positive, alpha-beta T cell
2
astrocyte of the cerebellum
2
astrocyte of the hippocampus
2
basal cell
2
bronchial epithelial cell
2
choroid plexus epithelial cell
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
erythroblast
2
fibroblast of breast
2
fibroblast of the aortic adventitia
2
foreskin fibroblast
2
goblet cell
2
kidney capillary endothelial cell
2
kidney inner medulla collecting duct intercalated cell
2
mast cell
2
mature natural killer cell
2
memory T cell
2
memory regulatory T cell
2
myoepithelial cell of mammary gland
2
naive B cell
2
renal vesicle
2
skeletal muscle cell
2
skeletal muscle fiber
2
skeletal muscle satellite cell
2
skin fibroblast
2
smooth muscle cell
2
smooth muscle cell of the brain vasculature
1
brain microvascular endothelial cell
1
retinal pigment epithelial cell
1
B cell, CD19-positive
1
B-1a B cell
1
CD1c-positive myeloid dendritic cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
CD56-positive, CD161-positive immature natural killer cell
1
Heart fetal (cardiac muscle cell)
1
Leydig cell
1
Liver fetal (hepatocyte)
1
Satellite Cells, Skeletal Muscle
1
activated CD8-positive, alpha-beta T cell
1
activated pancreatic stellate cell
1
adipocyte
1
alpha-beta T cell
1
alternatively activated macrophage
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
astrocyte of the spinal cord
1
brain microvascular endothelial cell
1
brain pericyte
1
bronchial goblet cell
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
cell
1
cells - cultured fibroblasts
1
central memory CD4-positive, alpha-beta T cell
1
cholangiocyte
1
cortical cell of adrenal gland
1
cytotoxic T cell
1
effector memory CD4-positive, alpha-beta T cell
1
embryonic stem cell
1
endothelial cell of coronary artery
1
epidermal melanocyte
1
epithelial cell of amnion
1
epithelial cell of distal tubule
1
erythroid lineage cell
1
fat cell
1
fibroblast of arm
1
fibroblast of gingiva
1
fibroblast of mammary gland
1
fibroblast of peridontal ligament
1
fibroblast of pulmonary artery
1
fibroblast of the conjunctiva
1
fibroblast of villous mesenchyme
1
foreskin melanocyte
1
granulosa cell
1
helper T cell
1
inflammatory macrophage
1
iris pigment epithelial cell
1
leukocyte
1
luminal epithelial cell of mammary gland
1
luminal epithelial cell of prostatic duct
1
lung microvascular endothelial cell
1
lymphocyte of B lineage
1
mammary epithelial cell
1
mammary stem cell
1
mature B cell
1
megakaryocyte
1
megakaryocyte-erythroid progenitor cell
1
mesenchymal cell
1
mesenchymal stem cell of adipose
1
meso-epithelial cell
1
mesothelial cell
1
microglial cell
1
myeloid dendritic cell
1
naive regulatory T cell
1
naive t cell
1
non-pigmented ciliary epithelial cell
1
pancreatic A cell
1
pancreatic cell
1
pancreatic endocrine cell
1
pancreatic epsilon cell
1
parietal cell
1
peptic cell
1
pericardium fibroblast
Organ
2
brain
Life stage
1
adult
1
unknown
Date released
2
September, 2022
1
May, 2020
Software used
2
r
1
deltasvm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
annotation_category!
cis-regulatory elements
Showing 3 of 3 results
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Download
FileSet
DSR139AGU
released
Annotation file set
: Target gene predictions for BSS01216 mammary stem cell from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR228YYU
released
Annotation file set
: Target gene predictions for BSS00090 astrocyte of the cerebellum from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR019JSU
released
Annotation file set
: Genetic variants with deltaSVM predictions in brain cerebellum astrocyte DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP