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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
target gene predictions
Annotation Category
cis-regulatory elements
3
Target gene links
Annotation type Category
2
ChIP-seq
2
DNase-seq
1
pCHi-C
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
cell line
Biosample term
55
HeLa-S3
47
H1-hESC
25
heart
23
K562
23
islet of Langerhans
23
kidney
23
monocyte
22
stomach
21
endothelial cell
19
A549
19
CD14-positive monocyte
19
HFFc6
19
hepatocyte
19
liver
18
adrenal gland
18
brain
18
epithelial cell of proximal tubule
18
lung
17
induced pluripotent stem cell
17
muscle of arm
17
small intestine
16
glomerular endothelial cell
15
adipose tissue
15
placenta
15
subcutaneous adipose tissue
14
common myeloid progenitor, CD34-positive
14
large intestine
14
muscle of leg
14
thymus
13
EndoC_BH1
13
left lung
13
muscle of back
13
pancreatic ductal cell
12
B cell
12
body of pancreas
12
neural progenitor cell
12
smooth muscle cell
11
cardiomyocytes
11
coronary artery
11
hematopoietic multipotent progenitor cell
11
pancreatic delta cell
11
regulatory T cell
11
right kidney
11
right lung
11
tibial nerve
10
T-helper 1 cell
10
T-helper 17 cell
10
fibroblast
10
heart left ventricle
10
macrophage
10
pancreatic acinar cell
10
pancreatic alpha cell
10
pancreatic beta cell
10
pericyte cell
10
pituitary stalk
10
renal cortex interstitium
10
renal pelvis
10
right atrium auricular region
9
CD4-positive, alpha-beta memory T cell
9
adipocyte
9
caudate nucleus
9
extended pluripotent stem (EPS) cells
9
frontal cortex
9
left kidney
9
omental fat pad
9
progenitor cell of endocrine pancreas
9
spleen
9
tibial artery
8
CD8-positive, alpha-beta T cell
8
GM12878
8
H9
8
ascending aorta
8
cardiomyocytes (cardiac muscle cell)
8
cerebellum
8
naive thymus-derived CD4-positive, alpha-beta T cell
8
neutrophil
8
psoas muscle
8
spinal cord
7
Ammon's horn
7
CD8-positive, alpha-beta memory T cell
7
dendritic cell
7
glomerular visceral epithelial cell
7
heart right ventricle
7
kidney loop of Henle thin ascending limb epithelial cell
7
lymphocyte
7
natural killer cell
7
ovary
7
putamen
7
sigmoid colon
7
substantia nigra
7
trophoblast cell
6
MCF-7
6
T cell
6
T-helper 2 cell
6
cardiac precursors (cardiac muscle cell)
6
cerebellum (Hemisphere)
6
keratinocyte
6
kidney interstitial cell
6
mesenchymal stem cell
6
mononuclear cell
6
olfactory receptor cell
6
pancreas
6
pancreatic stellate cell
6
right lobe of liver
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
C1 segment of cervical spinal cord
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
amygdala
5
anterior cingulate cortex
5
aorta
5
astrocyte
5
endothelial cell of umbilical vein
5
gastrocnemius medialis
5
gastrocnemius medialis(Muscle - Skeletal)
5
hypothalamus
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
left ventricle myocardium
5
mammary gland epithelial cell
5
memory B cell
5
mesangial cell
5
muscle of trunk
5
naive thymus-derived CD8-positive, alpha-beta T cell
5
nucleus accumbens
5
retina
5
skeletal muscle myoblast
5
skeletal muscle tissue
5
thyroid gland
5
transverse colon
4
CD4-positive helper T cell
4
CyT49
4
HUES8
4
adult endothelial progenitor cell
4
bone tissue
4
cardiac muscle cell
4
cartilage tissue
4
chorionic villus
4
colon epithelial cell
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
endocrine pancreas
4
endothelial cell of hepatic sinusoid
4
fibroblast of cardiac tissue
4
fibroblast of dermis
4
fibroblast of lung
4
foreskin keratinocyte
4
gamma-delta T cell
4
iPSC derived cell line
Disease term
2
prostate adenocarcinoma
Organ
2
prostate gland
Life stage
2
unknown
Date released
2
September, 2022
1
March, 2020
Software used
2
r
1
nospecificsoft_customcode
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
annotation_category!
cis-regulatory elements
software_used.software.name!
qTLtools
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR579JOO
released
Annotation file set
: Target gene predictions for BSS00002 22Rv1 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR563HXM
released
Annotation file set
: Target gene predictions for BSS00001 22Rv1 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR870IAS
released
Annotation file set
: A target gene prediction annotation in Human Lymphoblasts of GSE86189 pCHi-C
Lab:
AMP-T2D consortium
Project:
AMP