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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
eQTL
1
gene expression
Annotation Category
cis-regulatory elements
2
Genetic variant effects
1
Gene expression levels
Annotation type Category
3
RNA-seq
Available data
1
tsv
File set status
3
released
Genome assembly (visualization)
2
GRCh38
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
55
HeLa-S3
46
H1-hESC
31
islet of Langerhans
26
monocyte
23
K562
20
endothelial cell
19
A549
19
CD14-positive monocyte
19
HFFc6
18
liver
17
epithelial cell of proximal tubule
17
induced pluripotent stem cell
16
hepatocyte
15
adipose tissue
15
glomerular endothelial cell
15
subcutaneous adipose tissue
14
common myeloid progenitor, CD34-positive
14
macrophage
13
regulatory T cell
12
B cell
12
EndoC_BH1
12
pancreatic ductal cell
11
T-helper 1 cell
11
T-helper 17 cell
11
adrenal gland
11
body of pancreas
11
cardiomyocytes
11
hematopoietic multipotent progenitor cell
10
coronary artery
10
kidney
10
pancreatic delta cell
10
pericyte cell
10
pituitary stalk
10
smooth muscle cell
10
stomach
10
tibial nerve
9
CD4-positive, alpha-beta memory T cell
9
caudate nucleus
9
cerebellum
9
extended pluripotent stem (EPS) cells
9
frontal cortex
9
naive thymus-derived CD4-positive, alpha-beta T cell
9
neutrophil
9
omental fat pad
9
pancreatic acinar cell
9
pancreatic alpha cell
9
pancreatic beta cell
9
progenitor cell of endocrine pancreas
9
right atrium auricular region
9
spleen
9
substantia nigra
8
CD8-positive, alpha-beta T cell
8
GM12878
8
adipocyte
8
natural killer cell
8
neural progenitor cell
8
psoas muscle
8
putamen
8
tibial artery
7
Ammon's horn
7
CD8-positive, alpha-beta memory T cell
7
H9
7
T-helper 2 cell
7
ascending aorta
7
cardiomyocytes (cardiac muscle cell)
7
dendritic cell
7
heart left ventricle
7
kidney loop of Henle thin ascending limb epithelial cell
7
lymphocyte
7
ovary
7
sigmoid colon
6
MCF-7
6
T cell
6
amygdala
6
anterior cingulate cortex
6
fibroblast
6
glomerular visceral epithelial cell
6
hypothalamus
6
iPSC derived cell line
6
kidney interstitial cell
6
lymphoblastoid cell line
6
mesenchymal stem cell
6
mononuclear cell
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
nucleus accumbens
6
olfactory receptor cell
6
pancreas
6
pancreatic stellate cell
6
right lobe of liver
6
skeletal muscle tissue
6
small intestine
6
thyroid gland
6
transverse colon
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
C1 segment of cervical spinal cord
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
astrocyte
5
cerebellum (Hemisphere)
5
gastrocnemius medialis
5
gastrocnemius medialis(Muscle - Skeletal)
5
heart
5
keratinocyte
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
left ventricle myocardium
5
lung
5
memory B cell
5
mesangial cell
4
CD4-positive helper T cell
4
CyT49
4
HUES8
4
adult endothelial progenitor cell
4
aorta
4
bone tissue
4
cartilage tissue
4
colon epithelial cell
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
endocrine pancreas
4
endothelial cell of hepatic sinusoid
4
endothelial cell of umbilical vein
4
esophagus
4
fibroblast of dermis
4
fibroblast of lung
4
foreskin keratinocyte
4
gamma-delta T cell
4
heart right ventricle
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
layer of hippocampus
4
mammary gland epithelial cell
4
nephron progenitor
4
osteoblast
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic endothelial cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
skeletal muscle myoblast
4
skeletal muscle satellite cell
4
smooth muscle cell of the coronary artery
4
testis
4
thymus
4
type I muscle cell
4
type II muscle cell
4
uterus
Organ
3
brain
Life stage
embryonic
1
fetal
Date released
2
January, 2022
1
February, 2020
Software used
2
qTLtools
deltasvm
1
r
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
annotation_category!
cis-regulatory elements
relevant_life_stage!
embryonic
software_used.software.name!
deltasvm
Showing 3 of 3 results
table-tab-icon
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Download
FileSet
DSR191XXQ
released
Annotation file set
: brain naive eQTL of studay ROSMAP from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR999BSN
released
Annotation file set
: brain eQTL of studay BrainSeq from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR267EUN
released
Annotation file set
: Gene expression levels of Brain fetal from RNA-seq (GSE63634)
Lab:
AMP-T2D consortium
Project:
AMP