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Schema
Citing CMDGA
Clear Filters
Annotation type
4
target gene predictions
1
variant allelic effects
Annotation Category
cis-regulatory elements
4
Target gene links
1
Genetic variant effects
Annotation type Category
4
DNase-seq
2
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
1
HiC
Available data
4
bed bed3+
File set status
5
released
Genome assembly (visualization)
4
hg19
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
22
endothelial cell
19
hepatocyte
18
epithelial cell of proximal tubule
16
glomerular endothelial cell
13
EndoC_BH1
13
pancreatic ductal cell
11
pancreatic delta cell
10
pancreatic acinar cell
10
pancreatic alpha cell
10
pancreatic beta cell
7
glomerular visceral epithelial cell
7
kidney loop of Henle thin ascending limb epithelial cell
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
Connecting Tubule Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
Medullary Thick Ascending Limb Cell
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Transitional Principal-Intercalated Cell
5
endothelial cell of umbilical vein
5
kidney cortex collecting duct principal cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
mammary gland epithelial cell
4
colon epithelial cell
4
endothelial cell of hepatic sinusoid
4
kidney connecting tubule epithelial cell
4
kidney distal convoluted tubule epithelial cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic endothelial cell
4
pancreatic gamma+epsilon cell
4
pancreatic polypeptide-secreting cell
3
S-shaped body
3
breast epithelium
3
cortical cell of adrenal gland
3
enterocyte
3
epithelial cell of esophagus
3
epithelial cell of prostate
3
hepatocyte(AFP)
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney epithelial cell
3
kidney glomerular epithelial cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney tubule cell
3
luminal epithelial cell of mammary gland
3
pancreatic A cell
3
renal cortical epithelial cell
3
type B pancreatic cell
3
type II pneumocyte
2
bronchial epithelial cell
2
choroid plexus epithelial cell
2
esophagus squamous epithelium
2
goblet cell
2
kidney capillary endothelial cell
2
kidney inner medulla collecting duct intercalated cell
2
mesothelial cell
2
myoepithelial cell of mammary gland
2
parietal cell
2
peptic cell
2
renal vesicle
2
thyroid follicular cell
1
brain microvascular endothelial cell
1
retinal pigment epithelial cell
1
Liver fetal (hepatocyte)
1
brain microvascular endothelial cell
1
breast - mammary tissue
1
bronchial goblet cell
1
cardiac endothelial cell
1
cholangiocyte
1
club cell
1
eccrine cell
1
endocardial cell
1
endothelial cell of coronary artery
1
endothelial cell of lymphatic vessel
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
epithelial cell of amnion
1
epithelial cell of distal tubule
1
esophagus - mucosa
1
foveolar cell of stomach
1
granulosa cell
1
intermediate endothelial cell
1
iris pigment epithelial cell
1
kidney loop of Henle ascending limb epithelial cell
1
kidney loop of Henle thin descending limb epithelial cell
1
luminal epithelial cell of prostatic duct
1
lung microvascular endothelial cell
1
mammary epithelial cell
1
meso-epithelial cell
1
myoepithelial cell
1
nephron tubule
1
non keratinizing barrier epithelial cell
1
non-pigmented ciliary epithelial cell
1
paneth cell
1
proximal tubule
1
pulmonary artery endothelial cell
1
renal alpha-intercalated cell
1
renal beta-intercalated cell
1
renal connecting tubule
1
renal glomerulus
1
renal principal cell
1
respiratory goblet cell
1
retinal pigment epithelial cell
1
small intestine goblet cell
1
stomach neuroendocrine cell
1
type I cell of adrenal cortex
1
type I pneumocyte
1
type II cell of adrenal cortex
1
ureteric bud
Organ
5
blood vessel
5
epithelium
5
vasculature
5
vein
Life stage
3
newborn
Date released
2
September, 2022
1
March, 2020
1
May, 2020
1
May, 2021
Software used
2
r
1
abc
1
deltasvm
1
hiccups
Lab
4
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
5
AMP
RFA
5
AMP
annotation_category!
cis-regulatory elements
organ_slims!
skin of body
thymus
Showing 5 of 5 results
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Download
FileSet
DSR936NVU
released
Annotation file set
: Target gene predictions for BSS00298 endothelial cell of umbilical vein from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR099GIV
released
Annotation file set
: Target gene predictions for BSS00296 endothelial cell of umbilical vein from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR784TGC
released
Annotation file set
: enhancer-gene predicton of endothelial_cell_of_umbilical_vein-Roadmap from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP
FileSet
DSR088CRI
released
Annotation file set
: Variant allelic effects of endothelial cell of umbilical vein ENCODE DHSseq
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR049KAF
released
Annotation file set
: A target gene prediction annotation in endothelial cell of umbilical vein of DSR430XOJ Hi-C
Lab:
AMP-T2D consortium
Project:
AMP