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Citing CMDGA
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Annotation type
3
target gene predictions
Annotation Category
cis-regulatory elements
3
Target gene links
Annotation type Category
1
ChIP-seq
1
DNase-seq
1
pCHi-C
1
snATAC-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
2
megakaryocyte
1
stromal cell of bone marrow
Organ
513
epithelium
353
kidney
188
connective tissue
brain
159
pancreas
118
vasculature
114
musculature of body
97
heart
94
embryo
89
blood vessel
82
intestine
81
lung
76
limb
65
liver
61
bodily fluid
61
uterus
58
blood
50
adipose tissue
50
skin of body
48
large intestine
37
extraembryonic component
35
artery
35
stomach
24
adrenal gland
24
small intestine
20
bone element
20
mammary gland
18
placenta
18
prostate gland
17
esophagus
16
gonad
16
ureter
15
spinal cord
14
thymus
13
eye
12
nerve
12
pituitary gland
11
penis
10
spleen
9
lymph node
9
ovary
9
thyroid gland
8
lymphatic vessel
7
lymphoid tissue
7
testis
6
mouth
6
vein
5
breast
4
bronchus
4
urinary bladder
4
vagina
3
bone marrow
3
skeleton
3
tongue
1
nose
1
pericardium
Life stage
1
unknown
Date released
1
January, 2021
1
May, 2020
1
September, 2022
Software used
1
chicago
1
cicero
1
r
Lab
2
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Project
2
AMP
1
T1D
RFA
2
AMP
1
T1D
annotation_category!
cis-regulatory elements
disease_term_name!
type 2 diabetes mellitus
organ_slims!
brain
Showing 3 of 3 results
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Download
FileSet
DSR928GVV
released
Annotation file set
: Target gene predictions for BSS01661 stromal cell of bone marrow from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR345BXM
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of megakaryocyte
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR992TVD
released
Annotation file set
: Target gene predictions annotation of EGAS00001001911 promoter capture Hi-C of megakaryocyte
Lab:
AMP-T2D consortium
Project:
AMP