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Schema
Citing CMDGA
Clear Filters
Annotation type
2
target gene predictions
1
variant allelic effects
Annotation Category
28
cis-regulatory elements
2
Target gene links
1
Genetic variant effects
Annotation type Category
3
DNase-seq
2
ChIP-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Biosample term
55
HeLa-S3
39
H1-hESC
23
K562
22
heart
22
stomach
21
islet of Langerhans
19
A549
19
CD14-positive monocyte
19
HFFc6
19
brain
18
adrenal gland
18
liver
18
lung
18
small intestine
17
muscle of arm
16
kidney
16
placenta
15
macrophage
14
common myeloid progenitor, CD34-positive
14
large intestine
14
muscle of leg
14
thymus
13
adipose tissue
13
left lung
13
muscle of back
12
endothelial cell
12
fibroblast
11
coronary artery
11
monocyte
11
right kidney
11
right lung
11
smooth muscle cell
10
B cell
10
body of pancreas
10
heart left ventricle
10
hematopoietic multipotent progenitor cell
10
pericyte cell
10
pituitary stalk
10
renal cortex interstitium
10
renal pelvis
10
subcutaneous adipose tissue
10
tibial nerve
9
CD4-positive, alpha-beta memory T cell
9
caudate nucleus
9
left kidney
9
neutrophil
9
right atrium auricular region
9
spinal cord
9
spleen
9
tibial artery
8
GM12878
8
H9
8
T cell
8
frontal cortex
8
naive thymus-derived CD4-positive, alpha-beta T cell
8
psoas muscle
8
putamen
8
substantia nigra
7
CD8-positive, alpha-beta memory T cell
7
adipocyte
7
ascending aorta
7
cerebellum
7
lymphocyte
7
omental fat pad
7
ovary
7
pancreas
7
sigmoid colon
7
trophoblast cell
6
Ammon's horn
6
MCF-7
6
dendritic cell
6
heart right ventricle
6
hepatocyte
6
iPSC derived cell line
6
keratinocyte
6
lymphoblastoid cell line
6
mesenchymal stem cell
6
mononuclear cell
6
natural killer cell
6
olfactory receptor cell
6
regulatory T cell
6
thyroid gland
6
transverse colon
5
CD8-positive, alpha-beta T cell
5
amygdala
5
anterior cingulate cortex
5
cerebellum (Hemisphere)
5
endothelial cell of umbilical vein
5
gastrocnemius medialis
5
hypothalamus
5
mammary gland epithelial cell
5
muscle of trunk
5
neural progenitor cell
5
nucleus accumbens
5
pancreatic delta cell
5
retina
5
right lobe of liver
5
skeletal muscle tissue
4
C1 segment of cervical spinal cord
4
CD4-positive helper T cell
4
CyT49
4
HUES8
4
T-helper 1 cell
4
T-helper 17 cell
4
T-helper 2 cell
4
aorta
4
astrocyte
4
cardiac muscle cell
4
cardiomyocytes (cardiac muscle cell)
4
cartilage tissue
4
chorionic villus
4
colon epithelial cell
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
endocrine pancreas
4
esophagus
4
fibroblast of cardiac tissue
4
fibroblast of dermis
4
fibroblast of lung
4
foreskin keratinocyte
4
gastrocnemius medialis(Muscle - Skeletal)
4
layer of hippocampus
4
left ventricle myocardium
4
pancreatic acinar cell
4
pancreatic alpha cell
4
pancreatic beta cell
4
pancreatic ductal cell
4
skeletal muscle myoblast
4
skin of body
4
testis
3
CD4-positive, alpha-beta T cell
3
HCT116
3
HepG2
3
Peyer's patch
3
SK-N-SH
3
activated CD4-positive, alpha-beta T cell
3
basal cell
3
blood cell
3
breast epithelium
3
chorion membrane
3
cortical cell of adrenal gland
3
endometrium adenocarcinoma
3
enterocyte
3
epithelial cell of esophagus
3
epithelial cell of prostate
3
esophagus muscularis mucosa
3
foreskin fibroblast
3
immortal human breast epithelial cell line cell
3
left renal cortex interstitium
3
left renal pelvis
3
luminal epithelial cell of mammary gland
3
mesendoderm
3
myofibroblast cell
3
naive T cell
3
naive thymus-derived CD8-positive, alpha-beta T cell
3
neurosphere
3
pancreatic A cell
3
prostate gland
3
right renal cortex interstitium
3
right renal pelvis
3
skin fibroblast
3
thoracic aorta
3
trophoblast
3
type B pancreatic cell
3
type I muscle cell
3
type II muscle cell
3
type II pneumocyte
3
upper lobe of left lung
3
uterus
3
vagina
2
cardiac fibroblast
2
muscle of leg
2
22Rv1
2
A673
2
BJAB cell
2
Brodmann (1909) area 46
2
EndoC_BH1
2
GM18507
2
GM19238
2
GM19239
2
GM19240
2
H7-hESC
2
HAP-1
2
HT-29
2
IMR-90
2
Jurkat
2
KARPAS-422 cell
2
LNCaP clone FGC
2
LoVo cell
2
MCF 10A cell
2
MIN6
2
MM.1S
2
NAMALWA cell
2
OCI-LY7
2
PC-9
2
Panc1
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
SK-N-DZ
2
Schwann cell
2
T-cell
2
T47D
Organ
3
kidney
3
ureter
Life stage
2
embryonic
Date released
2
September, 2022
1
May, 2020
Software used
2
r
1
deltasvm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
annotation_type!
accessible chromatin
Showing 3 of 3 results
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Download
FileSet
DSR568NBS
released
Annotation file set
: Target gene predictions for BSS01153 left renal pelvis from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR989WFM
released
Annotation file set
: Target gene predictions for BSS01152 left renal pelvis from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR694REX
released
Annotation file set
: Genetic variants with deltaSVM predictions in kidney left renal pelvis DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP