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Schema
Citing CMDGA
Clear Filters
Annotation type
3
eQTL
1
variant allelic effects
Annotation Category
79
cis-regulatory elements
44
Target gene links
4
Genetic variant effects
2
Gene expression levels
Annotation type Category
3
RNA-seq
1
snATAC-seq
Available data
1
bed bed3+
File set status
4
released
Genome assembly (visualization)
3
GRCh38
1
hg19
Organism
4
Homo sapiens
Biosample type
3
tissue
1
primary cell
Biosample term
3
skin of body
1
keratinocyte
Organ
82
brain
47
connective tissue
46
epithelium
35
pancreas
33
vasculature
27
blood vessel
27
heart
22
adipose tissue
22
limb
22
musculature of body
20
kidney
17
artery
16
liver
7
nerve
6
intestine
5
esophagus
5
spinal cord
4
skin of body
3
bodily fluid
3
eye
3
gonad
3
stomach
3
ureter
2
adrenal gland
2
blood
2
large intestine
2
lung
2
prostate gland
2
testis
2
thyroid gland
1
breast
1
bronchus
1
extraembryonic component
1
mammary gland
1
mouth
1
ovary
1
pituitary gland
1
placenta
1
small intestine
1
spleen
1
uterus
1
vagina
1
vein
Date released
3
January, 2022
1
February, 2024
Software used
3
qTLtools
1
deltasvm
Lab
3
AMP-T2D consortium
1
Bing Ren, UCSD
Project
4
AMP
RFA
4
AMP
annotation_type!
candidate regulatory elements
biosample_term_name!
natural killer cell
Showing 4 of 4 results
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Download
FileSet
DSR079ISQ
released
Annotation file set
: skin eQTL of studay TwinsUK from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR474RUC
released
Annotation file set
: skin sun exposed eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR085ZSH
released
Annotation file set
: skin not sun exposed eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR684JHV
released
Annotation file set
: Variant allelic effects annotation of Keratinocytes from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP