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Citing CMDGA
Clear Filters
Annotation type
eQTL
2
hQTL
1
meQTL
1
sQTL
Annotation Category
105
cis-regulatory elements
15
Gene expression levels
4
Genetic variant effects
2
Target gene links
Annotation type Category
2
ChIP-seq
1
DNA methylation profiling by array assay
1
RNA-seq
Available data
2
bed bed3+
File set status
4
released
Genome assembly (visualization)
3
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
6
fibroblast
4
endothelial cell
4
macrophage
4
monocyte
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
neutrophil
3
enterocyte
3
myofibroblast cell
3
smooth muscle cell
2
cardiac fibroblast
2
CD4-positive helper T cell
2
Schwann cell
2
T cell
2
basal cell
2
cardiac muscle cell
2
epithelial cell of esophagus
2
goblet cell
2
hepatocyte
2
skeletal muscle fiber
2
vascular associated smooth muscle cell
1
brain microvascular endothelial cell
1
retinal pigment epithelial cell
1
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
Satellite Cells, Skeletal Muscle
1
adipocyte
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain pericyte
1
bronchial goblet cell
1
choroid plexus epithelial cell
1
cortical cell of adrenal gland
1
endothelial cell of umbilical vein
1
epithelial cell of proximal tubule
1
fibroblast of the aortic adventitia
1
glomerular endothelial cell
1
granulosa cell
1
hepatic stellate cell
1
keratinocyte
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
luminal epithelial cell of prostatic duct
1
lymphocyte of B lineage
1
mammary gland epithelial cell
1
mast cell
1
mesenchymal stem cell
1
mesothelial cell
1
naive t cell
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
1
pancreatic ductal cell
1
pancreatic endocrine cell
1
pancreatic polypeptide-secreting cell
1
parietal cell
1
peptic cell
1
renal cortical epithelial cell
1
skeletal muscle cell
1
skeletal muscle myoblast
1
smooth muscle cell of the brain vasculature
1
smooth muscle cell of the coronary artery
1
thyroid follicular cell
1
type I muscle cell
1
type II muscle cell
1
type II pneumocyte
Life stage
4
adult
Date released
4
May, 2021
Software used
4
limix
2
macs
1
minfi
1
sqtlseeker
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
annotation_type!
eQTL
biosample_term_name!
CD4-positive, alpha-beta memory T cell
Showing 4 of 4 results
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Download
FileSet
DSR337BHM
released
Annotation file set
: PSI splicing quantitative trait loci (sQTLs) from RNA-seq of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR301CXZ
released
Annotation file set
: methylation quantitative trait loci (meQTLs) from DAN methylation of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 196 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR650UBZ
released
Annotation file set
: histone quantitative trait loci (hQTL) from H3K4me1 ChIP-seq of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR930EID
released
Annotation file set
: histone quantitative trait loci (hQTL) from H3K27ac ChIP-seq of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP