Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
eQTL
2
variant allelic effects
Annotation Category
28
cis-regulatory elements
10
Target gene links
5
Genetic variant effects
2
Gene expression levels
Annotation type Category
3
RNA-seq
2
snATAC-seq
Available data
2
bed bed3+
File set status
5
released
Genome assembly (visualization)
3
GRCh38
2
hg19
Organism
5
Homo sapiens
Biosample type
3
tissue
2
primary cell
Biosample term
2
epithelial cell of esophagus
1
esophagus
1
esophagus mucosa
1
esophagus muscularis mucosa
Organ
81
brain
47
connective tissue
46
epithelium
33
pancreas
33
vasculature
27
blood vessel
27
heart
22
adipose tissue
22
limb
22
musculature of body
20
kidney
17
artery
16
liver
7
nerve
6
intestine
5
esophagus
5
spinal cord
4
skin of body
3
bodily fluid
3
eye
3
gonad
3
stomach
3
ureter
2
adrenal gland
2
blood
2
large intestine
2
lung
2
prostate gland
2
testis
2
thyroid gland
1
breast
1
bronchus
1
extraembryonic component
1
mammary gland
1
mouth
1
ovary
1
pituitary gland
1
placenta
1
small intestine
1
spleen
1
uterus
1
vagina
1
vein
Date released
3
January, 2022
2
February, 2024
Software used
3
qTLtools
2
deltasvm
Lab
3
AMP-T2D consortium
2
Bing Ren, UCSD
Project
5
AMP
RFA
5
AMP
annotation_type!
variant to gene
biosample_term_name!
layer of hippocampus
Showing 5 of 5 results
table-tab-icon
matrix-icon
Download
FileSet
DSR493GNB
released
Annotation file set
: esophagus muscularis eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR390AFD
released
Annotation file set
: esophagus mucosa eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR591WDD
released
Annotation file set
: esophagus gej eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR545JGJ
released
Annotation file set
: Variant allelic effects annotation of Esophageal epithelial cells (sub-type2) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP
FileSet
DSR761QWI
released
Annotation file set
: Variant allelic effects annotation of Esophageal epithelial cells from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
AMP