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Annotation type
161
eQTL
74
Fine-mapped variants
16
variant allelic effects
4
sQTL
2
hQTL
2
variant to gene
1
meQTL
1
pQTL
Annotation Category
3
Genetic variant effects
Annotation type Category
2
ChIP-seq
1
quantitative proteomics
Available data
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
tissue
Biosample term
1
cartilage tissue
1
monocyte
1
neutrophil
Organ
1
connective tissue
Life stage
3
adult
Date released
2
May, 2021
1
August, 2021
Software used
2
limix
2
macs
1
fastqtl
1
peer
Lab
2
AMP-T2D consortium
1
ITG
Project
2
AMP
1
ITG
RFA
2
AMP
1
ITG
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FileSet
DSR651XSZ
released
Annotation file set
: pQTL of high grade (highly degraded; lesioned) cartilage tissue from 115 patients undergoing joint replacement for osteoarthritis.
Lab:
ITG
Project:
ITG
FileSet
DSR676ZHI
released
Annotation file set
: histone quantitative trait loci (hQTL) from H3K27ac ChIP-seq of BLUEPRINT epigenome project of human immune cell types (CD16+ neutrophils) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR930EID
released
Annotation file set
: histone quantitative trait loci (hQTL) from H3K27ac ChIP-seq of BLUEPRINT epigenome project of human immune cell types (CD14+ monocytes) from up to 197 individuals.
Lab:
AMP-T2D consortium
Project:
AMP