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Citing CMDGA
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Annotation type
1
eQTL
Annotation Category
10
cis-regulatory elements
4
Target gene links
1
Gene expression levels
1
Genetic variant effects
Annotation type Category
1
RNA-seq
snATAC-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
20
islet of Langerhans
10
subcutaneous adipose tissue
8
coronary artery
8
liver
8
monocyte
7
macrophage
7
putamen
7
right atrium auricular region
7
tibial artery
7
tibial nerve
6
caudate nucleus
6
frontal cortex
6
lymphoblastoid cell line
6
naive thymus-derived CD4-positive, alpha-beta T cell
6
neutrophil
6
substantia nigra
5
adipose tissue
5
amygdala
5
anterior cingulate cortex
5
ascending aorta
5
body of pancreas
5
cerebellum
5
cerebellum (Hemisphere)
5
hypothalamus
5
nucleus accumbens
5
omental fat pad
4
Ammon's horn
4
C1 segment of cervical spinal cord
4
cartilage tissue
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
gastrocnemius medialis(Muscle - Skeletal)
4
left ventricle myocardium
4
right lobe of liver
3
blood cell
3
brain
3
heart left ventricle
3
skin of body
2
cardiac fibroblast
2
muscle of leg
2
CD4-positive helper T cell
2
MIN6
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
T cell
2
articular chondrocyte
2
blood
2
fibroblast
2
heart
2
iPSC derived cell line
2
kidney
2
muscle
2
pancreas
2
regulatory T cell
2
retina
2
skeletal muscle tissue
2
tissue
1
brain microvascular endothelial cell
1
hindlimb muscle
1
left kidney
1
omental fat pad
1
retinal pigment epithelial cell
1
Adipose SGBS cell line (adipocyte)
1
EndoC_BH1
1
Heart fetal (cardiac muscle cell)
1
Leydig cell
1
Liver fetal (hepatocyte)
1
Preadipose SGBS cell line (adipocyte)
1
T follicular helper cell
1
T-helper 1 cell
1
T-helper 17 cell
1
T-helper 2 cell
1
abdominal aorta artery
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
adrenal gland
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain pericyte
1
breast
1
cardiac muscle cell
1
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
cerebellar hemisphere
1
cerebrospinal fluid
1
choroid plexus epithelial cell
1
colon sigmoid
1
cortex
1
cortex of kidney
1
dorsolateral prefrontal cortex
1
endothelial cell
1
endothelial cell of umbilical vein
1
epithelial cell of proximal tubule
1
esophagus
1
esophagus mucosa
1
esophagus muscularis mucosa
1
fat cell
1
globus pallidus
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
heart right ventricle
1
helper T cell
1
hepatic stellate cell
1
hepatocyte
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
layer of hippocampus
1
left cardiac atrium
1
left renal cortex interstitium
1
left renal pelvis
1
lung
1
medulla oblongata
1
mesenchymal stem cell
1
microglial cell
1
midbrain
1
middle frontal gyrus
1
minor salivary gland
1
muscle of arm
1
naive B cel
1
naive t cell
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell
1
nephron tubule
1
occipital lobe
1
ovary
1
pituitary gland
1
placenta
1
pons
1
progenitor cell
1
prostate gland
1
purified protein and synthetic DNA oligo binding assay
1
renal cortex interstitium
1
renal cortical epithelial cell
1
renal glomerulus
1
renal pelvis
right kidney
1
right renal cortex interstitium
1
right renal pelvis
1
sensory neuron
1
skeletal muscle cell
1
skeletal muscle myoblast
1
small intestine
1
smooth muscle cell
1
smooth muscle cell of the brain vasculature
1
spinal cord
1
spleen
1
stomach
1
superior temporal gyrus
1
synovial joint
1
testis
1
thoracic aorta
1
thyroid gland
1
transverse colon
1
type I muscle cell
1
type II muscle cell
1
uterus
1
vagina
1
visceral abdominal adipose tissue
Organ
1
connective tissue
Date released
1
February, 2024
Software used
1
qTLtools
Lab
1
Stephen Parker, UMich
Project
1
AMP
RFA
1
AMP2
annotation_type_category!
snATAC-seq
biosample_term_name!
right kidney
Showing 1 of 1 results
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Download
FileSet
DSR033HJN
released
Annotation file set
: Expression QTLs of mesenchymal stem cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP