Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
caQTL
1
eQTL
1
variant allelic effects
Annotation Category
20
cis-regulatory elements
6
Target gene links
3
Genetic variant effects
1
Gene expression levels
Annotation type Category
2
snATAC-seq
1
RNA-seq
Available data
3
bed bed3+
1
bigBed narrowPeak
1
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
11
islet of Langerhans
8
subcutaneous adipose tissue
6
coronary artery
6
fibroblast
6
liver
6
right atrium auricular region
6
tibial artery
6
tibial nerve
5
ascending aorta
5
body of pancreas
5
cerebellum (Hemisphere)
5
frontal cortex
5
naive thymus-derived CD4-positive, alpha-beta T cell
5
neutrophil
4
Ammon's horn
4
C1 segment of cervical spinal cord
4
adipose tissue
4
amygdala
4
anterior cingulate cortex
4
cartilage tissue
4
caudate nucleus
4
cerebellum
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
endothelial cell
4
gastrocnemius medialis(Muscle - Skeletal)
4
hypothalamus
4
left ventricle myocardium
4
monocyte
4
nucleus accumbens
4
omental fat pad
4
putamen
4
right lobe of liver
4
smooth muscle cell
4
substantia nigra
3
enterocyte
3
macrophage
3
myofibroblast cell
2
cardiac fibroblast
2
muscle of leg
2
MIN6
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
Schwann cell
2
T cell
2
basal cell
2
blood
2
cardiac muscle cell
2
epithelial cell of esophagus
2
goblet cell
2
heart
2
heart left ventricle
2
hepatocyte
2
kidney
2
mesenchymal stem cell
2
skeletal muscle fiber
2
skeletal muscle tissue
2
tissue
2
type I muscle cell
2
type II muscle cell
2
vascular associated smooth muscle cell
1
brain microvascular endothelial cell
1
hindlimb muscle
1
left kidney
1
omental fat pad
1
retinal pigment epithelial cell
1
Adipose SGBS cell line (adipocyte)
1
EndoC_BH1
1
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
Preadipose SGBS cell line (adipocyte)
1
Satellite Cells, Skeletal Muscle
1
adipocyte
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain
1
brain pericyte
1
bronchial goblet cell
1
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
cerebrospinal fluid
1
choroid plexus epithelial cell
1
cortical cell of adrenal gland
1
epithelial cell of proximal tubule
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
granulosa cell
1
heart right ventricle
1
keratinocyte
1
kidney epithelial cell
1
left cardiac atrium
1
left renal pelvis
1
luminal epithelial cell of prostatic duct
1
lymphocyte of B lineage
1
mammary gland epithelial cell
1
mast cell
1
mesothelial cell
1
muscle of arm
1
naive t cell
1
nephron tubule
1
occipital lobe
1
pancreas
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
1
pancreatic ductal cell
1
pancreatic endocrine cell
1
pancreatic polypeptide-secreting cell
1
parietal cell
1
peptic cell
1
progenitor cell
1
purified protein and synthetic DNA oligo binding assay
1
renal cortex interstitium
1
renal cortical epithelial cell
1
renal glomerulus
1
renal pelvis
1
retina
1
right renal pelvis
1
skeletal muscle cell
1
smooth muscle cell of the brain vasculature
1
synovial joint
1
thoracic aorta
1
thyroid follicular cell
1
type II pneumocyte
Organ
2
connective tissue
1
epithelium
1
pancreas
Life stage
1
adult
Date released
2
February, 2024
1
October, 2022
Software used
1
deltasvm
1
eigenmt
1
qTLtools
1
rasqual
Lab
2
Stephen Parker, UMich
1
Kyle Gaulton, UCSD
Project
3
AMP
RFA
2
AMP2
1
AMP
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR450DUL
released
Annotation file set
: Chromatin site QTLs of mesenchymal stem cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR033HJN
released
Annotation file set
: Expression QTLs of mesenchymal stem cell from Stephen Parker Lab of FNIH skeletal muscle
Lab:
Stephen Parker, UMich
Project:
AMP
FileSet
DSR260PUK
released
Annotation file set
: Genetic variants with deltaSVM predictions in pancreatic gamma cell snATAC
Lab:
Kyle Gaulton, UCSD
Project:
AMP