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Schema
Citing CMDGA
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Annotation type
2
eQTL
Annotation Category
23
cis-regulatory elements
2
Genetic variant effects
1
Gene expression levels
Annotation type Category
2
RNA-seq
Available data
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
GRCh38
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
17
islet of Langerhans
8
subcutaneous adipose tissue
7
liver
7
macrophage
7
putamen
6
caudate nucleus
6
lymphoblastoid cell line
6
monocyte
6
substantia nigra
5
amygdala
5
anterior cingulate cortex
5
cerebellum
5
coronary artery
5
frontal cortex
5
hypothalamus
5
nucleus accumbens
5
omental fat pad
5
right atrium auricular region
5
tibial artery
5
tibial nerve
4
Ammon's horn
4
C1 segment of cervical spinal cord
4
ascending aorta
4
body of pancreas
4
cerebellum (Hemisphere)
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
gastrocnemius medialis(Muscle - Skeletal)
4
left ventricle myocardium
4
naive thymus-derived CD4-positive, alpha-beta T cell
4
neutrophil
4
right lobe of liver
3
adipose tissue
3
blood cell
3
cartilage tissue
3
skin of body
2
T cell
2
articular chondrocyte
2
blood
2
brain
2
fibroblast
2
iPSC derived cell line
2
muscle
2
regulatory T cell
2
skeletal muscle tissue
1
Leydig cell
1
T follicular helper cell
1
T-helper 1 cell
1
T-helper 17 cell
1
T-helper 2 cell
1
abdominal aorta artery
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
adrenal gland
1
breast
1
cerebellar hemisphere
1
colon sigmoid
1
cortex
1
cortex of kidney
1
dorsolateral prefrontal cortex
1
endothelial cell of umbilical vein
1
esophagus
1
esophagus mucosa
1
esophagus muscularis mucosa
1
fat cell
1
globus pallidus
1
heart left ventricle
1
helper T cell
1
hepatic stellate cell
1
kidney capillary endothelial cell
1
kidney glomerular epithelial cell
1
layer of hippocampus
1
left renal cortex interstitium
1
lung
1
medulla oblongata
1
microglial cell
1
midbrain
1
middle frontal gyrus
1
minor salivary gland
1
naive B cel
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
natural killer cell
1
ovary
1
pancreas
1
pituitary gland
1
placenta
1
pons
1
progenitor cell
1
prostate gland
1
renal glomerulus
1
retina
1
right kidney
1
right renal cortex interstitium
1
sensory neuron
1
skeletal muscle myoblast
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
superior temporal gyrus
1
synovial joint
1
testis
1
thyroid gland
1
transverse colon
1
uterus
1
vagina
1
visceral abdominal adipose tissue
Organ
2
brain
Date released
2
January, 2022
Software used
2
qTLtools
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_term_name!
aorta
files.file_type!
bed bed3+
Showing 2 of 2 results
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Download
FileSet
DSR191XXQ
released
Annotation file set
: brain naive eQTL of studay ROSMAP from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR999BSN
released
Annotation file set
: brain eQTL of studay BrainSeq from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP