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Schema
Citing CMDGA
Clear Filters
Annotation type
1
eQTL
1
variant allelic effects
Annotation Category
58
cis-regulatory elements
14
Target gene links
7
Gene expression levels
2
Genetic variant effects
Annotation type Category
1
DNase-seq
1
RNA-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
20
islet of Langerhans
10
subcutaneous adipose tissue
8
coronary artery
8
liver
7
putamen
right atrium auricular region
7
tibial artery
7
tibial nerve
6
caudate nucleus
6
frontal cortex
6
lymphoblastoid cell line
6
substantia nigra
5
adipose tissue
5
amygdala
5
anterior cingulate cortex
5
ascending aorta
5
body of pancreas
5
cerebellum
5
cerebellum (Hemisphere)
5
hypothalamus
5
nucleus accumbens
5
omental fat pad
4
Ammon's horn
4
C1 segment of cervical spinal cord
4
cartilage tissue
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
gastrocnemius medialis(Muscle - Skeletal)
4
left ventricle myocardium
4
right lobe of liver
3
brain
3
heart left ventricle
3
skin of body
2
muscle of leg
2
MIN6
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
blood
2
heart
2
iPSC derived cell line
2
kidney
2
muscle
2
pancreas
2
retina
2
skeletal muscle tissue
2
tissue
1
hindlimb muscle
1
left kidney
1
omental fat pad
1
Adipose SGBS cell line (adipocyte)
1
EndoC_BH1
1
Preadipose SGBS cell line (adipocyte)
1
abdominal aorta artery
1
adrenal gland
1
breast
1
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
cerebellar hemisphere
1
cerebrospinal fluid
1
colon sigmoid
1
cortex
1
cortex of kidney
1
dorsolateral prefrontal cortex
1
esophagus
1
esophagus mucosa
1
esophagus muscularis mucosa
1
globus pallidus
1
glomerular visceral epithelial cell
1
heart right ventricle
1
layer of hippocampus
1
left cardiac atrium
1
left renal cortex interstitium
1
left renal pelvis
1
lung
1
medulla oblongata
1
midbrain
1
middle frontal gyrus
1
minor salivary gland
1
muscle of arm
1
nephron tubule
1
occipital lobe
1
ovary
1
pituitary gland
1
placenta
1
pons
1
prostate gland
1
purified protein and synthetic DNA oligo binding assay
1
renal cortex interstitium
1
renal glomerulus
1
renal pelvis
1
right kidney
1
right renal cortex interstitium
1
right renal pelvis
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
superior temporal gyrus
1
synovial joint
1
testis
1
thoracic aorta
1
thyroid gland
1
transverse colon
1
uterus
1
vagina
1
visceral abdominal adipose tissue
Organ
2
kidney
Life stage
1
fetal
Date released
1
August, 2021
1
May, 2020
Software used
1
deltasvm
1
matrix-eQTL
Lab
1
AMP-T2D consortium
1
Katalin Susztak, Upenn
Project
2
AMP
RFA
1
AMP
1
AMP2
biosample_term_name!
right atrium auricular region
biosample_type!
primary cell
Showing 2 of 2 results
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Download
FileSet
DSR049INR
released
Annotation file set
: eQTL of kidney from Katalin Susztak Lab based on 121 kidney samples
Lab:
Katalin Susztak, Upenn
Project:
AMP
FileSet
DSR821RRV
released
Annotation file set
: Genetic variants with deltaSVM predictions in kidney fetal DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP