Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
target gene predictions
Annotation Category
8
cis-regulatory elements
3
Target gene links
Annotation type Category
2
ChIP-seq
2
DNase-seq
1
ATAC-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
2
tissue
1
primary cell
Biosample term
17
small intestine
14
large intestine
7
sigmoid colon
5
transverse colon
4
colon epithelial cell
3
HCT116
3
Peyer's patch
2
HT-29
2
colonic mucosa
2
duodenal mucosa
2
enteric smooth muscle cell
2
mucosa of rectum
2
muscle layer of colon
2
muscle layer of duodenum
1
HCT-116 cell
1
SW480
1
enterocyte of epithelium of small intestine
1
paneth cell
1
rectum smooth muscle tissue
small intestine goblet cell
Organ
3
intestine
3
small intestine
1
epithelium
Life stage
2
adult
Date released
2
September, 2022
1
November, 2021
Software used
2
r
1
abc
Lab
2
AMP-T2D consortium
1
Bing Ren, UCSD
Project
2
AMP
1
ENCODE
RFA
2
AMP
1
ENCODE3
biosample_term_name!
small intestine goblet cell
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR898NWC
released
Annotation file set
: Target gene predictions for BSS00271 duodenal mucosa from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR037SHY
released
Annotation file set
: Target gene predictions for BSS00270 duodenal mucosa from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR802OCO
released
Annotation file set
: Target gene predictions of Small Intestinal Enterocyte from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE