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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
accessible chromatin
2
candidate regulatory elements
Annotation Category
5
cis-regulatory elements
2
Target gene links
Annotation type Category
8
ChIP-seq
5
DNase-seq
2
ATAC-seq
Available data
5
bed bed3+
1
bigWig
File set status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
8
foreskin fibroblast
7
adipose tissue
6
fibroblast of lung
6
omental fat pad
5
adipocyte
5
fibroblast of cardiac tissue
5
mesenchymal stem cell
5
osteoblast
5
subcutaneous abdominal adipose tissue
4
fibroblast of dermis
4
skin fibroblast
3
cardiac fibroblast
3
GM23248
3
brain pericyte
3
cardiac fibroblast
3
fibroblast of mammary gland
3
fibroblast of peridontal ligament
3
fibroblast of pulmonary artery
3
fibroblast of the conjunctiva
3
fibroblast of villous mesenchyme
3
hepatic stellate cell
2
HT1080
2
fibroblast of gingiva
2
fibroblast of the aortic adventitia
2
stromal cell of bone marrow
2
subcutaneous adipose tissue
1
adipose-derived mesenchymal stem cell
1
amnion mesenchymal stem cell
1
amniotic stem cell
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
fibroblast of skin of abdomen
1
pericyte cell
1
pulmonary interstitial fibroblast
Organ
5
connective tissue
Life stage
3
unknown
Date released
2
June, 2020
1
February, 2021
1
November, 2020
1
September, 2022
Software used
3
macs
1
encode-ccres
1
r
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
Showing 5 of 5 results
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Download
FileSet
DSR292OXQ
released
Annotation file set
: Candidate regulatory elements for BSS01397 osteoblast from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR906VQP
released
Annotation file set
: GSE120755 DNase-seq accessible chromatin annotation of osteoporosis cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR515FLX
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE osteoblast
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR028APK
released
Annotation file set
: Accessible chromatin annotation for Bone Osteobl from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR303JQK
released
Annotation file set
: Accessible chromatin annotation for Bone Osteoblasts from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP