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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
histone modifications
Annotation Category
4
cis-regulatory elements
2
Gene expression levels
2
Target gene links
1
Genetic variant effects
Annotation type Category
3
ChIP-seq
3
DNase-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
7
hg19
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
44
stomach
41
heart
34
brain
33
kidney
33
lung
33
muscle of arm
30
placenta
30
retina
30
small intestine
29
adrenal gland
29
large intestine
28
muscle of back
28
muscle of leg
26
left lung
23
right lung
23
thymus
20
liver
20
pigmented layer of retina
20
renal cortex interstitium
20
renal pelvis
20
right kidney
18
left kidney
17
spleen
15
spinal cord
12
heart left ventricle
11
sigmoid colon
10
adipose tissue
10
pancreas
10
testis
10
upper lobe of left lung
9
gastrocnemius medialis
9
layer of hippocampus
9
ovary
9
prostate gland
9
thyroid gland
9
transverse colon
8
Peyer's patch
8
body of pancreas
8
caudate nucleus
8
chorionic villus
8
islet of Langerhans
8
muscle of trunk
8
psoas muscle
7
endocrine pancreas
7
esophagus squamous epithelium
7
skeletal muscle tissue
7
substantia nigra
7
temporal lobe
7
tibial nerve
6
breast epithelium
6
colonic mucosa
6
esophagus muscularis mucosa
6
heart right ventricle
6
left renal cortex interstitium
6
left renal pelvis
6
lower leg skin
6
right renal pelvis
6
subcutaneous abdominal adipose tissue
6
trophoblast
5
cingulate gyrus
5
duodenal mucosa
5
eye
5
gastroesophageal sphincter
5
mucosa of rectum
5
omental fat pad
5
parathyroid adenoma
5
right renal cortex interstitium
5
stomach smooth muscle
5
tongue
4
angular gyrus
4
aorta
4
ascending aorta
4
cerebellum
4
chorion membrane
4
esophagus
4
globus pallidus
4
limb
4
midbrain
4
muscle layer of colon
4
muscle layer of duodenum
4
putamen
4
right atrium auricular region
4
thoracic aorta
4
tibial artery
4
umbilical cord
4
urinary bladder
4
uterus
4
vagina
3
Ammon's horn
3
coronary artery
3
cortex of kidney
3
frontal cortex
3
occipital lobe
3
prefrontal cortex
3
subcutaneous adipose tissue
3
superior temporal gyrus
3
suprapubic skin
2
Brodmann (1909) area 46
2
amnion
2
breast carcinoma
2
cerebellar cortex
2
chorion
2
embryonic facial prominence
2
endometrium cancer
2
femur
2
first pancreatic bud
2
germinal matrix
2
inferior parietal cortex
2
kidney epithelium
2
left cardiac atrium
2
mammary gland
2
medulla oblongata
2
middle frontal area 46
2
middle frontal gyrus
2
mucosa of stomach
2
placental basal plate
2
pons
2
rectum smooth muscle tissue
2
respiratory system smooth muscle
2
right cardiac atrium
2
right lobe of liver
2
skin of forearm
2
skin of prepuce of penis
1
Brodmann (1909) area 9
1
Crypt of Lieberkuhn
1
amygdala
1
anterior parahippocampal gyrus
1
arcuate nucleus of hypothalamus
1
arm bone
1
bed nucleus of stria terminalis
1
caput epididymis
1
cardiogenic mesoderm
1
cartilage tissue
1
circle of Willis
1
claustrum of brain
1
colon
1
corneal epithelium
1
crypt of Lieberkuhn
1
dentate nucleus
1
dorsal lateral geniculate nucleus
1
dura mater
1
endometrium
1
entorhinal cortex
1
epididymis
1
fallopian tube
1
forelimb muscle
1
frontal pole
1
germinal center
1
glomerular epithelium
1
gyrus rectus
1
hindlimb muscle
1
hypothalamus
1
intestinal epithelium
1
left leg bone
1
leg bone
1
locus ceruleus
1
medial dorsal nucleus of thalamus
1
medulloblastoma
1
mid-frontal lobe
1
morula
1
myelencephalon
1
nucleus accumbens
1
nucleus of ventral thalamus
1
pancreatic adenocarcinoma
1
pancreatic carcinoma
1
paraventricular nucleus of hypothalamus
1
pineal body
1
piriform cortex
1
pituitary gland
1
pontine tegmentum
1
precentral gyrus
1
precuneus cortex
1
pulvinar nucleus
1
raphe nuclei
1
rectal smooth muscle tissue
1
red nucleus
1
renal connecting tubule
1
renal cortex tubule
1
right arm bone
1
septal nuclear complex
1
skeletal muscle
1
skin of body
1
smooth muscle tissue
1
subiculum
1
superior parietal cortex
1
supramarginal gyrus
1
temporal pole
1
thalamic complex
1
white matter
Organ
4
brain
Life stage
2
adult
Date released
2
September, 2022
1
February, 2021
1
June, 2020
Software used
2
macs
2
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
assembly!
GRCh38
Showing 4 of 4 results
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Download
FileSet
DSR637NDW
released
Annotation file set
: Candidate regulatory elements for BSS00371 frontal cortex from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR546RID
released
Annotation file set
: Candidate regulatory elements for BSS00369 frontal cortex from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR706YII
released
Annotation file set
: Histone modifications annotation for Neural Superior_pariental_lobule from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR744GOP
released
Annotation file set
: Accessible chromatin annotation for Neural Cerebrum frontal OC from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP