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Schema
Citing CMDGA
Clear Filters
Annotation type
3
accessible chromatin
Annotation Category
5
Gene expression levels
3
cis-regulatory elements
1
Target gene links
Annotation type Category
3
snATAC-seq
Available data
3
bed bed3+
3
bigWig
File set status
3
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
3
endothelial cell of lymphatic vessel
Organ
436
epithelium
299
kidney
289
brain
272
connective tissue
248
musculature of body
230
lung
207
intestine
158
heart
157
bodily fluid
155
limb
skin of body
149
blood
148
vasculature
126
large intestine
121
embryo
117
pancreas
115
blood vessel
109
extraembryonic component
96
eye
91
liver
84
stomach
69
bone element
67
mammary gland
60
prostate gland
60
small intestine
55
placenta
53
lymph node
53
penis
49
adrenal gland
48
ureter
40
artery
39
adipose tissue
35
thymus
34
gonad
28
esophagus
28
spinal cord
24
spleen
22
uterus
19
testis
17
lymphoid tissue
17
vein
15
skeleton
14
ovary
14
thyroid gland
13
lymphatic vessel
13
mouth
13
nerve
12
bronchus
10
bone marrow
8
breast
7
tongue
6
urinary bladder
6
vagina
5
trachea
3
nose
1
pituitary gland
Date released
2
November, 2021
1
April, 2020
Software used
2
macs
Lab
2
Bing Ren, UCSD
1
Xin Sun, UCSD
Project
2
ENCODE
1
LungMap
RFA
2
ENCODE3
1
LungMap2
biosample_term_name!
gastrocnemius medialis
organ_slims!
skin of body
Showing 3 of 3 results
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Download
FileSet
DSR165PFW
released
Annotation file set
: ATAC-seq peaks in lymphatic endothelial cells from lung snATAC-seq
Lab:
Xin Sun, UCSD
Project:
LungMap
FileSet
DSR427DYD
released
Annotation file set
: Accessible chromatin annotation of Lymphatic Endothelial Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR093JYI
released
Annotation file set
: Accessible chromatin annotation of Fetal Lymphatic Endothelial Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE