Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
candidate regulatory elements
1
chromatin state
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
2
ChIP-seq
1
DNase-seq
Available data
1
bed bed3+
1
bed bed9
File set status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
17
CD4-positive, alpha-beta memory T cell
10
common myeloid progenitor, CD34-positive
8
T-helper 17 cell
6
22Rv1
6
WI38
6
bronchial epithelial cell
6
epithelial cell of prostate
6
neutrophil
5
B cell
5
CD8-positive, alpha-beta memory T cell
5
fibroblast of lung
5
keratinocyte
5
osteoblast
4
dermis lymphatic vessel endothelial cell
4
fibroblast of dermis
4
lung microvascular endothelial cell
3
CD14-positive monocyte
3
CD1c-positive myeloid dendritic cell
3
CD4-positive, alpha-beta T cell
3
GM06990
3
GM12864
3
GM12865
3
KOPT-K1
3
L1-S8
3
PC-9
3
Panc1
3
T-helper 1 cell
3
T-helper 2 cell
3
adipocyte
3
aortic endothelial cell
3
astrocyte
3
astrocyte of the cerebellum
3
astrocyte of the hippocampus
3
astrocyte of the spinal cord
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
epithelial cell of esophagus
3
epithelial cell of proximal tubule
3
fibroblast of gingiva
3
fibroblast of mammary gland
3
fibroblast of peridontal ligament
3
fibroblast of pulmonary artery
3
fibroblast of the aortic adventitia
3
fibroblast of the conjunctiva
3
fibroblast of villous mesenchyme
3
glomerular endothelial cell
3
hematopoietic multipotent progenitor cell
3
iris pigment epithelial cell
3
kidney epithelial cell
3
mononuclear cell
3
naive thymus-derived CD4-positive, alpha-beta T cell
3
non-pigmented ciliary epithelial cell
3
pulmonary artery endothelial cell
3
regulatory T cell
3
renal cortical epithelial cell
3
retinal pigment epithelial cell
3
skeletal muscle cell
3
skeletal muscle myoblast
3
skeletal muscle tissue
3
smooth muscle cell of the brain vasculature
3
stromal cell of bone marrow
2
CWRU1
2
GM12891
2
GM12892
2
HK-2 cell
2
L1-S8R
2
NCI-H460 cell
2
NT2-D1 cell
2
T cell
2
T-cell
2
cardiac muscle cell
2
chorion membrane
2
colon carcinoma
2
colon epithelial cell
2
dermis microvascular lymphatic vessel endothelial cell
2
endocrine pancreas
2
epidermal melanocyte
2
epithelial cell of amnion
2
fibroblast of cardiac tissue
2
germinal center
2
hepatocyte
2
mammary gland epithelial cell
2
naive T cell
2
pericyte cell
2
regular cardiac myocyte
1
cardiac fibroblast
1
BL-2 cell
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
CD8-positive, alpha-beta T cell
1
DG-75 cell
1
GM08714
1
GM10248
1
GM10266
1
GM12801
1
GM12873
1
GM12874
1
GM12875
1
GM13976
1
GM13977
1
HCEC 1CT
1
HK-2
1
JVM-2 cell
1
KARPAS-422 cell
1
NCI-H460
1
NT2/D1
1
RKO
1
SUDHL5
1
U-266 cell
1
Z-138
1
amniotic epithelial cell
1
brain pericyte
1
cardiac fibroblast
1
effector memory CD4-positive, alpha-beta T cell
1
endothelial cell
1
excitatory neuron
1
hippocampal neuron
1
leukocyte
1
lower motor neuron
1
mammary epithelial cell
1
mesenchymal stem cell
1
myotube
1
pancreatic alpha cell
1
pancreatic beta cell
1
pancreatic delta cell
1
skeletal muscle satellite cell
1
smooth muscle cell
1
smooth muscle cell of the coronary artery
1
type I muscle cell
1
type II muscle cell
Organ
2
pancreas
Life stage
40
embryonic
25
adult
2
child
2
unknown
1
young adult
Date released
2
September, 2022
Software used
1
chromhmm
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
biosample_term_name!
HeLa-S3
Showing 2 of 2 results
table-tab-icon
matrix-icon
Download
FileSet
DSR293QVD
released
Annotation file set
: Candidate regulatory elements for BSS00282 endocrine pancreas from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR974BGU
released
Annotation file set
: Chromatin states for BSS00282 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP