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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
binding sites
1
histone modifications
Annotation Category
3
cis-regulatory elements
2
Target gene links
Annotation type Category
2
ChIP-seq
1
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
in vitro differentiated cells
Biosample term
105
monocyte
43
A549
43
CD8-positive, alpha-beta T cell
40
common myeloid progenitor, CD34-positive
35
B cell
32
hematopoietic multipotent progenitor cell
30
neural progenitor cell
25
retina
23
CD4-positive, alpha-beta memory T cell
23
fibroblast
23
liver
23
stomach
22
endothelial cell
20
MCF-7
20
breast cancer cell
20
kidney
20
pigmented layer of retina
20
spleen
19
adipocyte
19
adrenal gland
18
K562
18
foreskin keratinocyte
18
macrophage
17
heart left ventricle
17
natural killer cell
16
adipose tissue
16
embryonic stem cell
foreskin fibroblast
16
hepatocyte
16
sigmoid colon
15
CD8-positive, alpha-beta memory T cell
15
T cell
15
keratinocyte
15
retinal pigment epithelial cell
14
HepG2
14
endothelial cell of umbilical vein
14
pericyte cell
14
regulatory T cell
13
gastrocnemius medialis
13
mononuclear cell
13
pancreas
13
upper lobe of left lung
12
CD14-positive monocyte
12
CD4-positive, alpha-beta T cell
12
excitatory neuron
12
neuroblastoma cell
12
osteoblast
12
psoas muscle
12
skeletal muscle myoblast
12
thyroid gland
12
tibial nerve
11
Peyer's patch
11
bronchial epithelial cell
11
caudate nucleus
11
endothelial cell of hepatic sinusoid
11
fibroblast of lung
11
islet of Langerhans
11
mammary epithelial cell
11
transverse colon
10
EndoC_BH1
10
Rhabdomyosarcoma
10
gastric cancer cell
10
heart
10
layer of hippocampus
10
mammary gland epithelial cell
10
pancreatic ductal cell
10
skeletal muscle tissue
10
smooth muscle cell
10
temporal lobe
9
HeLa-S3
9
T-helper 1 cell
9
T-helper 17 cell
9
astrocyte
9
body of pancreas
9
coronary artery
9
diffuse intrinsic pontine glioma
9
endocrine pancreas
9
fibroblast of cardiac tissue
9
liposarcoma
9
ovary
9
prostate gland
9
substantia nigra
8
22Rv1
8
GM12878
8
SK-N-DZ
8
T-helper 2 cell
8
choroid plexus epithelial cell
8
esophagus squamous epithelium
8
fibroblast of dermis
8
mesenchymal stem cell
8
neuronal stem cell
8
pancreatic beta cell
8
skeletal muscle satellite cell
8
small intestine
8
tibial artery
7
B-lymphoblastoid cell line
7
GM06990
7
GM12864
7
GM12865
7
HL-60
7
aorta
7
brain
7
breast epithelium
7
colonic mucosa
7
epithelial cell of prostate
7
erythroblast
7
esophageal adenocarcinoma
7
esophagus muscularis mucosa
7
fibroblast cell line
7
heart right ventricle
7
hepatic stellate cell
7
kidney tubule cell
7
mature neutrophil
omental fat pad
7
pancreatic acinar cell
6
AG09309 cell
6
AG09319 cell
6
AG10803 cell
6
BE(2)-C
6
BJ cell
6
CD1c-positive myeloid dendritic cell
6
CMK
6
Caco-2 cell
6
Chondroid Chordoma
6
GM12875
6
GM19240
6
GM23248
6
HAP-1
6
HT-29
6
KARPAS-422 cell
6
LHCN-M2
6
MG63
6
MM.1S
6
NAMALWA cell
6
OCI-LY7
6
PC-3
6
PC-9
6
SW480
6
angular gyrus
6
ascending aorta
6
cardiac muscle cell
6
cerebellum
6
chondrocyte
6
cingulate gyrus
6
dermis blood vessel endothelial cell
6
duodenal mucosa
6
fibroblast of villous mesenchyme
6
foreskin melanocyte
6
globus pallidus
6
hESC cell
6
lower leg skin
6
lung
6
mast cell
6
midbrain
6
neuroblastoma cell line
6
neutrophil
6
right atrium auricular region
6
testis
6
thoracic aorta
6
thymus
5
Ammon's horn
5
CD14-positive, CD16-negative classical monocyte
5
Daoy
5
Ewing sarcoma
5
GM08714
5
GM10248
5
GM10266
5
GM12891
5
GM12892
5
GM19238
5
GM19239
5
HuH-7
5
Jurkat
5
KBM-7
5
LNCAP
5
LNCaP clone FGC
5
LoVo cell
5
NT2-D1 cell
5
OCI-LY1
5
RWPE1
5
Rh-4 cell
5
SGBS preadipocytes
5
SJSA1
5
SK-N-MC
5
T47D
5
WERI-Rb-1
5
acute myeloid leukemia
5
dermis lymphatic vessel endothelial cell
5
endothelial cell of lymphatic vessel
5
esophagus
5
fibroblast of breast
5
fibroblast of pulmonary artery
5
glomerular visceral epithelial cell
5
immortal human breast epithelial cell line cell
5
lymphoblastoid cell line
5
muscle layer of duodenum
5
myoepithelial cell of mammary gland
5
osteosarcoma
5
parathyroid adenoma
5
prostate cancer cell line
Life stage
embryonic
Date released
2
February, 2021
1
June, 2020
Software used
3
macs
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_term_name!
foreskin fibroblast
omental fat pad
relevant_life_stage!
embryonic
Showing 3 of 3 results
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Download
FileSet
DSR042QDJ
released
Annotation file set
: Histone modifications annotation for Pluripotent stem cell hESC_derived_mesendodermal_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR827VVM
released
Annotation file set
: Binding sites annotation for Pluripotent stem cell hESC_derived_mesendodermal_cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR746BZC
released
Annotation file set
: Accessible chromatin annotation for Pluripotent stem cell hESC derived mesendodermal cells from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP