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Citing CMDGA
Clear Filters
Annotation type
Fine-mapped variants
2
variant to gene
1
eQTL
1
sQTL
Annotation Category
4
Genetic variant effects
Annotation type Category
4
RNA-seq
Available data
2
tsv
File set status
4
released
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
14
retina
10
pigmented layer of retina
7
induced pluripotent stem cell
4
islet of Langerhans
4
pancreatic MUC5B+ductal cell
4
pancreatic acinar cell
4
pancreatic alpha cell
4
pancreatic alpha+beta cell
4
pancreatic beta cell
4
pancreatic cycling alpha cell
4
pancreatic delta cell
4
pancreatic ductal cell
4
pancreatic endothelial cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
pancreatic stellate cell
3
EndoC_BH1
3
pancreatic quiescent stellate cell
2
coronary artery
1
endothelial cell
1
fibroblast of the aortic adventitia
1
macrophage
1
purified protein and synthetic DNA oligo binding assay
1
smooth muscle cell of the coronary artery
Organ
4
pancreas
Date released
9
February, 2021
8
August, 2021
4
March, 2023
3
January, 2022
3
March, 2020
3
May, 2020
3
May, 2021
2
August, 2017
1
April, 2019
1
February, 2024
1
January, 2018
1
January, 2020
1
June, 2020
1
November, 2019
1
November, 2021
1
September, 2022
0
February, 2023
Software used
4
qTLtools
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
annotation_type!
Fine-mapped variants
month_released!
August, 2022
Showing 4 of 4 results
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Download
FileSet
DSR083JNZ
released
Annotation file set
: All significant variant-to-gene associations for phenotypes with a sQTL effect at FDR 1%.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR642HGW
released
Annotation file set
: All significant variant-to-gene associations for phenotypes with a eQTL effect at FDR 1%.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR615JGJ
released
Annotation file set
: Lead variant-to-phenotype associations identified using permutations. Contains data for all phenotypes (eGene/Junction) with an sQTL effect at FDR 1%.
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR651OZU
released
Annotation file set
: Lead variant-to-phenotype associations identified using permutations. Contains data for all phenotypes (eGene/Junction) with an eQTL effect at FDR 1%.
Lab:
AMP-T2D consortium
Project:
AMP