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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
accessible chromatin
1
candidate regulatory elements
chromatin state
1
target gene predictions
Annotation Category
1
Target gene links
1
cis-regulatory elements
Annotation type Category
2
ChIP-seq
2
DNase-seq
Available data
2
bed bed3+
File set status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
64
heart
64
stomach
55
kidney
53
brain
52
lung
50
muscle of arm
47
adrenal gland
47
small intestine
45
placenta
42
large intestine
41
muscle of back
41
muscle of leg
39
left lung
36
liver
36
thymus
35
islet of Langerhans
33
right lung
31
right kidney
30
renal cortex interstitium
29
renal pelvis
27
left kidney
26
spleen
24
adipose tissue
23
heart left ventricle
23
spinal cord
20
body of pancreas
18
subcutaneous adipose tissue
18
tibial nerve
17
sigmoid colon
16
caudate nucleus
16
ovary
15
coronary artery
15
psoas muscle
15
substantia nigra
14
omental fat pad
14
pancreas
14
retina
14
right atrium auricular region
14
testis
14
thyroid gland
14
transverse colon
13
cerebellum
13
gastrocnemius medialis
13
heart right ventricle
13
muscle of trunk
13
skeletal muscle tissue
13
tibial artery
12
ascending aorta
12
chorionic villus
12
frontal cortex
12
layer of hippocampus
12
putamen
12
upper lobe of left lung
11
endocrine pancreas
11
prostate gland
10
Peyer's patch
9
Ammon's horn
9
aorta
9
left renal cortex interstitium
9
left renal pelvis
9
right renal pelvis
9
temporal lobe
8
breast epithelium
8
esophagus
8
esophagus muscularis mucosa
8
esophagus squamous epithelium
8
lower leg skin
8
right lobe of liver
8
right renal cortex interstitium
8
trophoblast
8
vagina
7
amygdala
7
colonic mucosa
7
hypothalamus
7
nucleus accumbens
7
parathyroid adenoma
7
thoracic aorta
7
uterus
6
angular gyrus
6
anterior cingulate cortex
6
cerebellum (Hemisphere)
6
chorion membrane
6
cingulate gyrus
6
duodenal mucosa
6
eye
6
gastroesophageal sphincter
6
mucosa of rectum
6
muscle layer of colon
6
muscle layer of duodenum
6
stomach smooth muscle
6
tongue
5
C1 segment of cervical spinal cord
5
cartilage tissue
5
gastrocnemius medialis(Muscle - Skeletal)
5
globus pallidus
5
left cardiac atrium
5
left ventricle myocardium
5
limb
5
midbrain
5
occipital lobe
5
right cardiac atrium
5
skin of body
5
subcutaneous abdominal adipose tissue
5
urinary bladder
4
Brodmann (1909) area 46
4
bone tissue
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
middle frontal gyrus
4
superior temporal gyrus
4
umbilical cord
4
visceral abdominal adipose tissue
3
amnion
3
cerebellar cortex
3
cortex of kidney
3
dorsolateral prefrontal cortex
3
femur
3
germinal matrix
3
medulla oblongata
3
mucosa of stomach
3
pons
3
suprapubic skin
2
muscle of leg
2
arm bone
2
blood
2
breast carcinoma
2
chorion
2
embryonic facial prominence
2
endometrium cancer
2
fallopian tube
2
first pancreatic bud
2
germinal center
2
inferior parietal cortex
2
kidney epithelium
2
leg bone
2
mammary gland
2
middle frontal area 46
2
minor salivary gland
2
pituitary gland
2
placental basal plate
2
prefrontal cortex
2
rectum smooth muscle tissue
2
respiratory system smooth muscle
2
skin of forearm
2
skin of prepuce of penis
2
tissue
1
hindlimb muscle
1
left kidney
1
omental fat pad
1
Brodmann (1909) area 9
1
Crypt of Lieberkuhn
1
Pancreatic islets
1
abdominal aorta artery
1
anterior parahippocampal gyrus
1
aorta wall
1
aortic valve
1
arcuate nucleus of hypothalamus
1
bed nucleus of stria terminalis
1
beige adipocyte
1
bladder
1
bladder (urinary bladder)
1
breast
1
breast - mammary tissue
1
caput epididymis
1
cardiac ventricle
1
cardiogenic mesoderm
1
cerebellar hemisphere
1
cerebrospinal fluid
1
cervix - ectocervix
1
cervix - endocervix
1
circle of Willis
1
claustrum of brain
1
colon
1
colon - sigmoid
1
colon - transverse
1
colon sigmoid
1
corneal epithelium
1
cortex
1
dentate nucleus
1
diencephalon
1
dorsal lateral geniculate nucleus
1
dura mater
1
endometrium
1
entorhinal cortex
1
epididymis
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
esophagus mucosa
1
forelimb muscle
1
frontal pole
1
gastric (mucosa of stomach)
1
gyrus rectus
1
hindlimb muscle
1
intestinal epithelium
1
kidney - cortex
1
kidney - medulla
1
left leg bone
1
locus ceruleus
1
medial dorsal nucleus of thalamus
1
medulloblastoma
Organ
2
brain
Life stage
2
adult
Date released
2
September, 2022
Software used
2
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
annotation_type!
accessible chromatin
chromatin state
Showing 2 of 2 results
table-tab-icon
matrix-icon
Download
FileSet
DSR078FOK
released
Annotation file set
: Candidate regulatory elements for BSS00729 inferior parietal cortex from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR847XAH
released
Annotation file set
: Target gene predictions for BSS00729 inferior parietal cortex from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP